DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1299 and CG32260

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:546 Identity:179/546 - (32%)
Similarity:242/546 - (44%) Gaps:152/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PRYNPVTERPRNPFFPSESTFIGP--QPPPEVPDNPFLIPT-------PRT-------------- 136
            |.| |....|..||.|     |||  .|.|.:|..|.:|||       |:|              
  Fly    46 PPY-PAPPPPPPPFQP-----IGPLIPPQPALPSTPAVIPTFQPTPPNPQTPVTPPLITTSSSTT 104

  Fly   137 ---------TTTTT--TTTPAPIPDTSAAPL---------------IEPR--------------- 160
                     |||||  ||.|.|:|...:.||               |:||               
  Fly   105 SSTTSTTGLTTTTTAGTTLPLPMPTCPSQPLVCLTGGARPLPNCPCIDPRQQQNSPLLSSTGPQI 169

  Fly   161 GT---------------------VCRGPDTKPGNCVEIKECASLLNELRSRSQDATFANFLRASN 204
            |:                     .|:...::||:|:.:..|..|:.|.:.::.:  |..||  ..
  Fly   170 GSDMMVFMPLNSGRRRRRRRRPQSCQDARSRPGSCLPLTSCPQLMQEYQGQANE--FHTFL--GQ 230

  Fly   205 AVCQNKGT--QVCC----------------------------PTGQGITNT------TPAPSQIV 233
            ::|...|:  .|||                            |...|.|.|      ||..||:|
  Fly   231 SICGFDGSTFMVCCATDRSGNARSRKDVFVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQVV 295

  Fly   234 ---------PKNTDEIPRRLLNVEEGCGSTVGYFKKIVGGEVSRKGAWPWIALLGY---DDPSGS 286
                     |...:..||.    ...||.:.....::|||..:||||:||||.|||   ::.:..
  Fly   296 SPSFYPPPPPPPPNNAPRE----SATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNAL 356

  Fly   287 PFKCGGTLITARHVLTAAHCIRQDLQFVRLGEHDLSTDTETGHVDINIARYVSHPDYNRRNGRSD 351
            .|.|||:||.:|:|:|:||||...|..||||.||||...|:|.:|:.|.|.|.|..::..:..:|
  Fly   357 KFLCGGSLIHSRYVITSAHCINPMLTLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISND 421

  Fly   352 MAILYLERNVEFTSKIAPICLPHTANLRQKSYVGYMPFVAGWGKTMEGGESAQVLNELQIPIYDN 416
            :|::.|.........|:|||||..|...|:.:||..|||||||.....|.::|||.:.|:||...
  Fly   422 IALIELNVVGALPGNISPICLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSR 486

  Fly   417 KVCVQSYAKEKRYFSADQFDKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYG 481
            ..|.|||   |..|...||...|||||  |...|.||||||||||:|:......||||:|:||:|
  Fly   487 HSCEQSY---KSIFQFVQFSDKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFG 546

  Fly   482 IGCARPNVPGVYSSTQYFMDWIIQQV 507
            ..|||||.||||:....::.||.:.:
  Fly   547 YECARPNFPGVYTRVASYVPWIKKHI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855 13/53 (25%)
Tryp_SPc 260..503 CDD:214473 113/245 (46%)
Tryp_SPc 261..503 CDD:238113 113/244 (46%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855 13/53 (25%)
Tryp_SPc 327..568 CDD:214473 113/245 (46%)
Tryp_SPc 328..571 CDD:238113 115/247 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I4208
eggNOG 1 0.900 - - E33208_3BK39
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I4210
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D112416at50557
OrthoFinder 1 1.000 - - FOG0014382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.870

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