DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1299 and CLIPC2

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_313588.3 Gene:CLIPC2 / 1274460 VectorBaseID:AGAP004317 Length:383 Species:Anopheles gambiae


Alignment Length:352 Identity:109/352 - (30%)
Similarity:163/352 - (46%) Gaps:45/352 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KPGNCVEIKECASLLNELRSRSQDATFANFLRASNAVCQNKGTQ--VCCPTG-----QGITNTTP 227
            :||.|.....|..||.:.|...              :|.....|  ||||..     |.:.:   
Mosquito    40 EPGICQGYNLCRPLLEKSRIVK--------------ICGYTSQQAVVCCPLDYRERLQQLND--- 87

  Fly   228 APSQIVPKNTDEIPRRLLNVEEGCGSTVGYFKK----------IVGGEVSRKGAWPWIALLGYDD 282
             |:|............||......||:|...|.          ||||..:|.|.:|.:|.|...|
Mosquito    88 -PNQRCRDYQSASNSGLLFGSLAVGSSVVKLKPRAQCPTDQNLIVGGTAARFGEFPHMARLAMPD 151

  Fly   283 PSGS-PFKCGGTLITARHVLTAAHCIRQDLQFVRLGEHDLSTDTETGHVDINIARYVSHPDYNRR 346
            .:|: .|:||.|||:.:.|:|||||:......|||||.....|.....||:.:.|.|.||:|..|
Mosquito   152 ENGAMVFRCGATLISEQWVMTAAHCLESQTIVVRLGELKEGNDEFGDPVDVQVTRIVKHPNYKPR 216

  Fly   347 NGRSDMAILYLERNVEFTSKIAPICLPHTANLRQKSYVGYMPFVAGWGKTMEGGESAQVLNELQI 411
            ...:|:|:|.|.|.|.|:.:|.|.||..::.:.:...|     ..|:|.|...|.:::.|.::.:
Mosquito   217 TVYNDIALLKLARPVTFSMRIRPACLYGSSTVDRTKAV-----AIGFGSTEAYGAASKELLKVSL 276

  Fly   412 PIYDNKVCVQSYAKEKRYFSADQFDKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIG 476
            .::....|...:.:.:|.  .....::.||||.||||:|||.|||||||.:....:..:. .:||
Mosquito   277 DVFTTAACSVFFQRNRRV--PQGLRESHLCAGFLSGGRDTCTGDSGGPLQISSEDEACVA-QIIG 338

  Fly   477 VVSYGIGCARPNVPGVYSSTQYFMDWI 503
            :.|:||||. ...||:|:....::|||
Mosquito   339 ITSFGIGCG-STTPGIYTRVSEYIDWI 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855 10/47 (21%)
Tryp_SPc 260..503 CDD:214473 85/253 (34%)
Tryp_SPc 261..503 CDD:238113 85/242 (35%)
CLIPC2XP_313588.3 Tryp_SPc 130..367 CDD:238113 87/244 (36%)
Tryp_SPc 130..364 CDD:214473 85/242 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
TreeFam 00.000 Not matched by this tool.
21.910

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