DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1299 and CLIPB8

DIOPT Version :9

Sequence 1:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_312743.1 Gene:CLIPB8 / 1273740 VectorBaseID:AGAP003057 Length:405 Species:Anopheles gambiae


Alignment Length:392 Identity:114/392 - (29%)
Similarity:185/392 - (47%) Gaps:51/392 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 APIPDTSAAPLIEPRGTVCRGP-DTKPGNCVEIKECASL--LNELRSRSQDATFANFLRASNAVC 207
            ||: ||...|:.:.. .:|..| :..||.|:...||.:.  :|::.|.|....| :|::  ...|
Mosquito    25 APM-DTDDRPVWDSI-RLCDIPNEPNPGQCMLPAECVAYGKINDVSSLSSIERF-SFIK--QIQC 84

  Fly   208 QNKGT--QVCCPTGQGITNTTPAPSQIVPKNTDEIPRRLLNVEEGCGSTVGYFKKIVGGEVSRKG 270
            ....|  .||||..............:||||  .:..|:....:.|| ...|..||.||:::...
Mosquito    85 NGSDTVPYVCCPRDSDAYREPYVNETMVPKN--RVASRIAFDADSCG-IQSYVAKIRGGQLAEID 146

  Fly   271 AWPWIALLGYD-DPSGSPFKCGGTLITARHVLTAAHCI--------RQDLQFVRLGEHDLST--- 323
            .:||:|:|.|: |.:.....|||.||:..:|:|||||:        :..|:||||.|:::.|   
Mosquito   147 EFPWMAMLLYERDNNALTQGCGGALISRTYVITAAHCVTGKNFQQTKGRLKFVRLREYNIHTNPD 211

  Fly   324 --------DTETGHVDINIARYVSHPDYNRR--NGRSDMAILYLERNVEFTSKIAPICLPHTANL 378
                    |.....:|:.....:.||:|:..  |.:.|:|::.:|:...||..:..||||. .|.
Mosquito   212 CVYENDLKDCSDDMIDLVPQAVIPHPEYDSESSNQQHDIALIRIEQTPPFTDFLRSICLPE-QNF 275

  Fly   379 RQKSYVGYMPFVAGWGKT--MEGGESAQVLN----ELQIPIYDNKVCVQSYAKEKRYFSADQFDK 437
            ...:..|....|:|||:|  .:......||:    :|.:|..:.:.|.:::..........|   
Mosquito   276 ESSATPGKKLSVSGWGRTDIFKDNLGPDVLSPIKLKLSLPYVEREKCSKTFRPWSFALGPGQ--- 337

  Fly   438 AVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGI-GCARPNVPGVYSSTQYFMD 501
              :|||. ...||||.||||.|||..:  ..:..:|:.|:||.|: ||....:||||::..:::.
Mosquito   338 --MCAGG-ERAKDTCAGDSGSPLMSYD--MKRAIWYITGIVSLGVRGCGVEGLPGVYTNVHHYLP 397

  Fly   502 WI 503
            ||
Mosquito   398 WI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1299NP_647862.1 CLIP 37..93 CDD:197829
CLIP 164..216 CDD:288855 15/56 (27%)
Tryp_SPc 260..503 CDD:214473 81/271 (30%)
Tryp_SPc 261..503 CDD:238113 80/270 (30%)
CLIPB8XP_312743.1 CLIP 41..95 CDD:288855 15/56 (27%)
Tryp_SPc 136..399 CDD:214473 81/271 (30%)
Tryp_SPc 139..400 CDD:238113 81/270 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X11
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.