DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras64B and RABA6a

DIOPT Version :9

Sequence 1:NP_523917.2 Gene:Ras64B / 38494 FlyBaseID:FBgn0003206 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_177505.1 Gene:RABA6a / 843698 AraportID:AT1G73640 Length:233 Species:Arabidopsis thaliana


Alignment Length:184 Identity:60/184 - (32%)
Similarity:99/184 - (53%) Gaps:11/184 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTI--EDSYTKQCNIDDVPAKLDILDTAGQEEFSA 68
            :|.|::|...||||.:..:|.:..|..|..|||  |.:| :..::.|...|..|.||||||.|.|
plant    14 FKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAY-RNVHVGDKIIKAQIWDTAGQERFRA 77

  Fly    69 MREQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKD--RDEFPMLMVGNKCDLKHQQQVSLE 131
            :...|.|...|.||::.:...::||.|.|:   :..::|  ..|..:::||||.||:..::|..:
plant    78 ITSSYYRGALGALLIYDITRRTTFDNIKKW---LFELRDFANPETVVVLVGNKSDLRQSREVEED 139

  Fly   132 EAQNTSRNLMIPYIECSAKLRVNVDQAFHELVRIVRKFQIAERPFIEQDYKKKG 185
            |.:..:.:..:.::|.||...|||::||  ||.|.|..::..:. |..:.|..|
plant   140 EGKTLAESEGLYFLETSALENVNVEEAF--LVMIGRIHEVVTQR-IASENKSNG 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras64BNP_523917.2 M_R_Ras_like 4..167 CDD:133345 56/164 (34%)
RABA6aNP_177505.1 Rab11_like 11..175 CDD:206660 57/166 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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