DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras64B and RABB1a

DIOPT Version :9

Sequence 1:NP_523917.2 Gene:Ras64B / 38494 FlyBaseID:FBgn0003206 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_193449.1 Gene:RABB1a / 827427 AraportID:AT4G17160 Length:205 Species:Arabidopsis thaliana


Alignment Length:199 Identity:63/199 - (31%)
Similarity:101/199 - (50%) Gaps:15/199 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YKLVVVGGGGVGKSAITIQFIQSYFVTDYDPTIEDSY-TKQCNIDDVPAKLDILDTAGQEEFSAM 69
            :|.:::|..|||||.:.::|....|...:|.||...: .|...||:.|.||.|.||||||.|.::
plant     7 FKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDTAGQESFRSV 71

  Fly    70 REQYMRSGEGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQ 134
            ...|.|...|.|||:.:....:|:.:..:..: .|....:....:::||||||:.::.||.||.:
plant    72 TRSYYRGRAGTLLVYDITRRETFNHLASWLEE-ARQHASENMTTMLIGNKCDLEDKRTVSTEEGE 135

  Fly   135 NTSRNLMIPYIECSAKLRVNVDQAFHE-LVRIVRKFQ-----------IAERPFIEQDYKKKGKR 187
            ..:|...:.::|.|||...||::||.| ...|.::.|           |...||..:|.....:|
plant   136 QFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEANEPGITPGPFGGKDASSSQQR 200

  Fly   188 K-CC 190
            : ||
plant   201 RGCC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras64BNP_523917.2 M_R_Ras_like 4..167 CDD:133345 55/162 (34%)
RABB1aNP_193449.1 PLN03108 1..204 CDD:178655 61/197 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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