DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rop and SLY1

DIOPT Version :9

Sequence 1:NP_001261404.1 Gene:Rop / 38493 FlyBaseID:FBgn0004574 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_010475.1 Gene:SLY1 / 851770 SGDID:S000002597 Length:666 Species:Saccharomyces cerevisiae


Alignment Length:656 Identity:139/656 - (21%)
Similarity:263/656 - (40%) Gaps:153/656 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WRVLVVDKLGMRMVSACTKMHEISAEGITLVEDINKKREPLPTMDAIYLITPSDESVRGLIRDFE 103
            |:||::|......:|:..:::::...|||:...|.:.|.|||.:.|||.::|:.|::..::.|.:
Yeast    53 WKVLILDIKSTATISSVLRVNDLLKAGITVHSLIKQDRSPLPDVPAIYFVSPTKENIDIIVNDLK 117

  Fly   104 NPARPMYRYAHVFFTEVCPEELFNDLCKSCA----AGKIKTLKEINIAFLPYECQVFSLDSPDTF 164
            :   ..|...::.||...|..|..||.:..:    :.|||.:.:..:.|:..|.::|||:..:.:
Yeast   118 S---DKYSEFYINFTSSLPRNLLEDLAQQVSITGKSDKIKQVYDQYLDFIVTEPELFSLEISNAY 179

  Fly   165 QCLYSPAFASIRSKHIERIAEQIATLCA-----------TLGEYPNVRYRSDWDRNIDLAASVQQ 218
            ..|..|          :...|:|..|||           |:...|.:|........| :|..:..
Yeast   180 LTLNDP----------KTTEEEITGLCANIADGLFNTVLTINSIPIIRAAKGGPAEI-IAEKLGT 233

  Fly   219 KL-----DAYKADDATMGEGPEKARSQLLILDRGFDCVSPLLHELTLQAMAYDLLPIVNDVYRY- 277
            ||     :...:..:|:.......|..|:||||..|..|...|....|.|.:|:..:..:.... 
Yeast   234 KLRDFVINTNSSSTSTLQGNDSLERGVLIILDRNIDFASMFSHSWIYQCMVFDIFKLSRNTVTIP 298

  Fly   278 ----------TPGPNQPDKEVLLDENDDLWVELRH-------EHI-AVVST--QVTQNLKKFTDS 322
                      |.......|:..::.||..|:|..|       |:: |.::|  :....:.:.|..
Yeast   299 LESKENGTDNTTAKPLATKKYDIEPNDFFWMENSHLPFPEAAENVEAALNTYKEEAAEITRKTGV 363

  Fly   323 KRMGSADKSSMRD---LSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQN-YVDKLCRVEQD--- 380
            ..:...|.:|..|   :.:::||:|:...:.:...||:::....:...:: .:|....||||   
Yeast   364 TNISDLDPNSNNDTVQIQEVVKKLPELTAKKNTIDTHMNIFAALLSQLESKSLDTFFEVEQDPGS 428

  Fly   381 -------LAMGTDAEGEKIKDHMRNIVPILLDA----------NVSNYDKVR---IIALYVMIKN 425
                   |.:..|.:...::|.:|:.:.:.|.:          ||.||.|..   |.||..:.| 
Yeast   429 TKTRSRFLDILKDGKTNNLEDKLRSFIVLYLTSTTGLPKDFVQNVENYFKENDYDINALKYVYK- 492

  Fly   426 GISEENLTKLFTHAQLSPKDQDM---------VRNLSCLGINVIADSR------------KKQYS 469
                  |.:....:.:|.:::.:         ..||:..||..:.:.:            ||  .
Yeast   493 ------LREFMQLSNMSLQNKSLEDGSDSAFKPSNLTLSGIYGLTEGKLQGGVGSLISGIKK--L 549

  Fly   470 VPRKERTTESTYQMSRWTPVIKDIMEDCIEDKLDLRHFPFLEGRAQNTN---YHAPTSARYGHWH 531
            :|.|:            |..|.::: |.|.|.|:..     :...:.|:   |..|...|..|..
Yeast   550 LPEKK------------TIPITNVV-DAIMDPLNSS-----QKNLETTDSYLYIDPKITRGSHTR 596

  Fly   532 KDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNW---------EVLVGSSHILSPEIFL 587
            |.|.|:..|:    :||:|||.:..|.:       .::.|         :|:.||:.|.:|..||
Yeast   597 KPKRQSYNKS----LVFVVGGGNYLEYQ-------NLQEWAHSQLHNPKKVMYGSTAITTPAEFL 650

  Fly   588 SDLGSL 593
            :::..|
Yeast   651 NEISRL 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RopNP_001261404.1 Sec1 40..583 CDD:395791 134/643 (21%)
SLY1NP_010475.1 SEC1 11..661 CDD:227487 139/656 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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