DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rop and stxbp1

DIOPT Version :9

Sequence 1:NP_001261404.1 Gene:Rop / 38493 FlyBaseID:FBgn0004574 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001072521.1 Gene:stxbp1 / 779976 XenbaseID:XB-GENE-945143 Length:604 Species:Xenopus tropicalis


Alignment Length:592 Identity:375/592 - (63%)
Similarity:465/592 - (78%) Gaps:18/592 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKVLVGQKLMNEVVKYKPPPPKKQGVTSAAGAGGMEWRVLVVDKLGMRMVSACTKMHEISAEGIT 67
            ||.:||:|:|::|::    ..||:|          ||:|||||:|.|||:|:|.||.:|..||||
 Frog     6 LKAVVGEKIMHDVIR----KVKKKG----------EWKVLVVDQLSMRMLSSCCKMTDIMTEGIT 56

  Fly    68 LVEDINKKREPLPTMDAIYLITPSDESVRGLIRDFENPARPMYRYAHVFFTEVCPEELFNDLCKS 132
            :||||||:|||:|:::|:||||||::||..||.||::|....||.||||||:.||:.|||:|.||
 Frog    57 IVEDINKRREPIPSLEAVYLITPSEKSVHSLISDFKDPPSSKYRAAHVFFTDSCPDTLFNELVKS 121

  Fly   133 CAAGKIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLGEY 197
            ..:..||||.||||||||||.||||||.||:|...|||..|.:::..:||:|||||||||||.||
 Frog   122 RTSKMIKTLTEINIAFLPYESQVFSLDYPDSFHSFYSPHKAQMKNPILERLAEQIATLCATLKEY 186

  Fly   198 PNVRYRSDWDRNIDLAASVQQKLDAYKADDATMGEGPEKARSQLLILDRGFDCVSPLLHELTLQA 262
            |.||||.|:..|..|:..:|.|||||||||.||||||:||||||:|||||||..||:|||||.||
 Frog   187 PAVRYRGDYKDNAMLSQLIQDKLDAYKADDPTMGEGPDKARSQLIILDRGFDPASPILHELTFQA 251

  Fly   263 MAYDLLPIVNDVYRY-TPG-PNQPDKEVLLDENDDLWVELRHEHIAVVSTQVTQNLKKFTDSKRM 325
            |:|||||:.||||:| |.| .:|..|||||||:|||||.|||:|||.||.:||::||.|:.||||
 Frog   252 MSYDLLPVENDVYKYETSGIGDQRMKEVLLDEDDDLWVTLRHKHIAEVSQEVTRSLKDFSASKRM 316

  Fly   326 GSADK-SSMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQNYVDKLCRVEQDLAMGTDAEG 389
            .:.|| ::|||||||:|||||||||||||||||||||||||.||..|||||||||||||||||||
 Frog   317 NTGDKVTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAMGTDAEG 381

  Fly   390 EKIKDHMRNIVPILLDANVSNYDKVRIIALYVMIKNGISEENLTKLFTHAQLSPKDQDMVRNLSC 454
            |||||.||.|||||||.|||.|||:|||.||:.:||||:||||.||..|||:.|:|.:::.|::.
 Frog   382 EKIKDPMRAIVPILLDGNVSTYDKIRIINLYIFLKNGITEENLNKLIQHAQIPPEDSEIITNMAH 446

  Fly   455 LGINVIADSRKKQYSVP-RKERTTESTYQMSRWTPVIKDIMEDCIEDKLDLRHFPFLEGRAQNTN 518
            ||:.:|.||..::.|.| ||||.:|.|||:||||||:||||||.|:||||.:|:|::..|:..:.
 Frog   447 LGVPIITDSTLRRRSKPDRKERISEQTYQLSRWTPVVKDIMEDTIDDKLDTKHYPYISTRSSASF 511

  Fly   519 YHAPTSARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGSSHILSP 583
            .....|||||||||:|...:.:..||||:||:|||::|||||||||:.|...||||:||:|||:|
 Frog   512 STTAVSARYGHWHKNKAPGEYRAGPRLIIFILGGVALSEMRCAYEVSQANGKWEVLIGSTHILTP 576

  Fly   584 EIFLSDL 590
            ..||.||
 Frog   577 TKFLEDL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RopNP_001261404.1 Sec1 40..583 CDD:395791 358/546 (66%)
stxbp1NP_001072521.1 Sec1 29..576 CDD:366407 358/546 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 720 1.000 Domainoid score I115
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2382
Inparanoid 1 1.050 738 1.000 Inparanoid score I602
OMA 1 1.010 - - QHG53928
OrthoDB 1 1.010 - - D289675at33208
OrthoFinder 1 1.000 - - FOG0000914
OrthoInspector 1 1.000 - - oto104066
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2284
SonicParanoid 1 1.000 - - X527
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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