DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rop and VPS33A

DIOPT Version :9

Sequence 1:NP_001261404.1 Gene:Rop / 38493 FlyBaseID:FBgn0004574 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_075067.2 Gene:VPS33A / 65082 HGNCID:18179 Length:596 Species:Homo sapiens


Alignment Length:622 Identity:120/622 - (19%)
Similarity:238/622 - (38%) Gaps:143/622 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGQKLMNEVVKYKPPPPKKQGVTSAAGAGGMEWRVLVVDKLGMRMVSACTKMHEISAEGITLVED 71
            |...::.|.|:.:    .::.:...||:..:.|...:....|:....:..|.||:. :..||   
Human    10 VNLNVLREAVRRE----LREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVE-KMFTL--- 66

  Fly    72 INKKREPLPTMDA---IYLITPS------------DESVRGLIRDFENPARPMYRYAHVFFTE-- 119
               |...||..|.   |:.:.|.            .|..||..|||           |:.|..  
Human    67 ---KGNRLPAADVKNIIFFVRPRLELMDIIAENVLSEDRRGPTRDF-----------HILFVPRR 117

  Fly   120 --VCPEELFNDLCKSCAAGKIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKHIER 182
              :| |:...||   ...|.....:|.::..:|::..:.|::|...|:..|...    ....:..
Human   118 SLLC-EQRLKDL---GVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEG----DQTSLYH 174

  Fly   183 IAEQIATLCATLGEYPNVRYRSDWDRNIDLAASVQQKLDAYKADDATMGEGPEKARSQLLILDRG 247
            .|:.:.||.|..|..|.:..:.:..|.: ....::.|.:...:.::..     .....||:|||.
Human   175 AAKGLMTLQALYGTIPQIFGKGECARQV-ANMMIRMKREFTGSQNSIF-----PVFDNLLLLDRN 233

  Fly   248 FDCVSPLLHELTLQAMAYDLLPIVNDVYRYTP-----------GPNQPD--KEVLLDENDDLWVE 299
            .|.::||..:||.:.:..::..|.|...:..|           |.:.|.  |::.|:..::|:.|
Human   234 VDLLTPLATQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGDGGKDLPTEAKKLQLNSAEELYAE 298

  Fly   300 LRHEHIAVVSTQVTQNLKKFT-------DSKRMGSADKSSMRDLSQMIKKMPQYQKELSKYSTHL 357
            :|.::...|.:.:::..|..:       ::|.:|        ::.|.:.::|..|......:.|.
Human   299 IRDKNFNAVGSVLSKKAKIISAAFEERHNAKTVG--------EIKQFVSQLPHMQAARGSLANHT 355

  Fly   358 HLAE---DCMKSYQNYVDKLCRVEQDLAMGTDAEGEKIKDHMRNIVPILLDANVSNYDKV-RIIA 418
            .:||   |...| :::.||| .|||:...|.|.  :|:.:::.:.:     |...:..|| |::.
Human   356 SIAELIKDVTTS-EDFFDKL-TVEQEFMSGIDT--DKVNNYIEDCI-----AQKHSLIKVLRLVC 411

  Fly   419 LYVMIKNGISEENL---------TKLFTHAQLSPKDQDMVRNLSCLGINVIADSRKKQYSVPRK- 473
            |..:..:|:.::.|         |..:.|..       .:.||...|:.......:..|...|| 
Human   412 LQSVCNSGLKQKVLDYYKREILQTYGYEHIL-------TLHNLEKAGLLKPQTGGRNNYPTIRKT 469

  Fly   474 ----------ERTTESTYQMSRWTPVIKDIME-------DCIEDKLDLRHFPFLEGRAQNTNYHA 521
                      :..|:.:|..|.:.|:...:.:       ..||:.|.:...|..|.|..     .
Human   470 LRLWMDDVNEQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQP-----L 529

  Fly   522 PTSARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEM 558
            ||..:.   .:..|:.:|     .::|.:|||:.:|:
Human   530 PTGLQK---KRQPGENRV-----TLIFFLGGVTFAEI 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RopNP_001261404.1 Sec1 40..583 CDD:395791 114/589 (19%)
VPS33ANP_075067.2 Sec1 34..584 CDD:395791 115/594 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.