DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rop and stxbp1a

DIOPT Version :9

Sequence 1:NP_001261404.1 Gene:Rop / 38493 FlyBaseID:FBgn0004574 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_005161170.1 Gene:stxbp1a / 574003 ZFINID:ZDB-GENE-050626-106 Length:603 Species:Danio rerio


Alignment Length:593 Identity:369/593 - (62%)
Similarity:464/593 - (78%) Gaps:17/593 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALKVLVGQKLMNEVVKYKPPPPKKQGVTSAAGAGGMEWRVLVVDKLGMRMVSACTKMHEISAEG 65
            :.||.:||:|:||:|:|    ..||:|          ||:.|:||:|.|||:|:|.||.:|..||
Zfish     4 IGLKAVVGEKIMNDVIK----KVKKKG----------EWKALIVDQLSMRMLSSCCKMTDIMTEG 54

  Fly    66 ITLVEDINKKREPLPTMDAIYLITPSDESVRGLIRDFENPARPMYRYAHVFFTEVCPEELFNDLC 130
            ||:||||.|:|||||:::|||||||:|:||:.||.||::|....|:.||||||:.||:.|||::.
Zfish    55 ITIVEDIMKRREPLPSLEAIYLITPTDKSVQTLINDFKDPHSAKYKGAHVFFTDSCPDPLFNEVV 119

  Fly   131 KSCAAGKIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCATLG 195
            ||.|:..||||.||||||||||.||||||:||.||..|||....:::..:||:|||:|||||||.
Zfish   120 KSRASKTIKTLNEINIAFLPYESQVFSLDNPDAFQSFYSPHKTQLKNPVMERLAEQLATLCATLK 184

  Fly   196 EYPNVRYRSDWDRNIDLAASVQQKLDAYKADDATMGEGPEKARSQLLILDRGFDCVSPLLHELTL 260
            |||.||||.::..|..||..:|.|||||||||.||||||:||||||:|||||||.|||:|||||.
Zfish   185 EYPAVRYRGEYKDNATLAQLLQDKLDAYKADDPTMGEGPDKARSQLIILDRGFDPVSPVLHELTF 249

  Fly   261 QAMAYDLLPIVNDVYRY-TPG-PNQPDKEVLLDENDDLWVELRHEHIAVVSTQVTQNLKKFTDSK 323
            ||||||||||.||||:| |.| .:..:|||||.|:|||||.|||:|||.||.:||::||:|:.||
Zfish   250 QAMAYDLLPIENDVYKYDTSGIGDSREKEVLLHEDDDLWVALRHKHIAEVSQEVTRSLKEFSASK 314

  Fly   324 RMGSADKSSMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQNYVDKLCRVEQDLAMGTDAE 388
            ||.:.:|::|||||||:|||||||||||||||||.|||||||.||..||||||||||||||||||
Zfish   315 RMNTGEKTTMRDLSQMLKKMPQYQKELSKYSTHLQLAEDCMKHYQGTVDKLCRVEQDLAMGTDAE 379

  Fly   389 GEKIKDHMRNIVPILLDANVSNYDKVRIIALYVMIKNGISEENLTKLFTHAQLSPKDQDMVRNLS 453
            ||||||.||.||||||||||:.|||:|||.||:.:||||:||||.||..|||:.|:|.:::.|::
Zfish   380 GEKIKDPMRAIVPILLDANVTTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPPEDSEIITNMA 444

  Fly   454 CLGINVIADSR-KKQYSVPRKERTTESTYQMSRWTPVIKDIMEDCIEDKLDLRHFPFLEGRAQNT 517
            .||:.:|.||. ::...:.||||.:|.|||:|||||:|||||||.|:||||.:|:|::..|:.::
Zfish   445 HLGVPIITDSTLRRGKKMDRKERVSEQTYQLSRWTPLIKDIMEDAIDDKLDTKHYPYISTRSSSS 509

  Fly   518 NYHAPTSARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGSSHILS 582
            ...:..|||||||||:|...:.:..||::|||:||.|.||||||||||.|...||.:|||:|.|:
Zfish   510 FSTSAVSARYGHWHKNKTPGEYRTGPRIMVFIIGGASFSEMRCAYEVTQANGKWEAIVGSTHSLT 574

  Fly   583 PEIFLSDL 590
            |..||.||
Zfish   575 PTKFLMDL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RopNP_001261404.1 Sec1 40..583 CDD:395791 350/545 (64%)
stxbp1aXP_005161170.1 Sec1 29..575 CDD:279352 350/545 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574595
Domainoid 1 1.000 715 1.000 Domainoid score I110
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2382
Inparanoid 1 1.050 738 1.000 Inparanoid score I581
OMA 1 1.010 - - QHG53928
OrthoDB 1 1.010 - - D289675at33208
OrthoFinder 1 1.000 - - FOG0000914
OrthoInspector 1 1.000 - - otm26568
orthoMCL 1 0.900 - - OOG6_100816
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X527
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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