DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rop and T07A9.10

DIOPT Version :9

Sequence 1:NP_001261404.1 Gene:Rop / 38493 FlyBaseID:FBgn0004574 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_499918.1 Gene:T07A9.10 / 176862 WormBaseID:WBGene00020298 Length:562 Species:Caenorhabditis elegans


Alignment Length:598 Identity:194/598 - (32%)
Similarity:326/598 - (54%) Gaps:55/598 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKVLVGQKLMNEVVKYKPPPPKKQGVTSAAGAGGMEWRVLVVDKLGMRMVSACTKMHEISAEGIT 67
            |:.||.::::..:::.:....|         .|..::.|||:||..|.:|::|..::|:..||:|
 Worm     2 LRELVKKQIIENILRPQNYDSK---------LGHRKFSVLVLDKSAMVVVNSCLSLNEVFEEGVT 57

  Fly    68 LVEDINKKREPLPTMDAIYLITPSDESVRGLIRDFE-----NPARPMYRYAHVFFTEVCPEELFN 127
            ||||:.:.|||:|:|||||:|:|..||:..||.||.     ||.. .||.||:||.:.|.:|||.
 Worm    58 LVEDLTRNREPMPSMDAIYIISPVAESIDILINDFSRKTKFNPGN-SYRSAHIFFLDPCCDELFE 121

  Fly   128 DLCKSCAAGKIKTLKEINIAFLPYECQVFSLDSPDTFQCLYSPAFASIRSKHIERIAEQIATLCA 192
            .|.||.|...||||||:|:...|.|.|:|:::|             ..|. .:.:.|:.|.:|||
 Worm   122 KLSKSPAVKWIKTLKELNLNLKPVESQIFTVNS-------------QFRG-DMTKTADGIVSLCA 172

  Fly   193 TLGEYPNVRYRSDWDRNIDLAASVQQKLDAYKADDATMGEGPEKARSQLLILDRGFDCVSPLLHE 257
            ||..:|.:|::||:.::.::...|:|||..:    ...|.|.:   ::|::|||.||.|||||||
 Worm   173 TLNIHPTLRFQSDFAQSSEICQRVEQKLKEF----GNEGMGTD---AELVVLDRSFDLVSPLLHE 230

  Fly   258 LTLQAMAYDLLPIVNDVYRYTPGPNQPDKEVLLDENDDLWVELRHEHIAVVSTQVTQNLKKF--T 320
            :|||||..|:....:.|||||...:  .||::|||.|..|::|||:.:..|...|.:.:|.|  |
 Worm   231 VTLQAMVVDVTAFKDGVYRYTEAGD--SKEIVLDEKDQNWLDLRHKLLPEVMKSVNKMVKDFKNT 293

  Fly   321 DSKRMGSADKSSMRDLSQMIKKMPQYQKELSKYSTHLHLAEDCMKSYQNYVDKLCRVEQDLAMGT 385
            :.....:....|.:|.|..::.:..|.|..:|.:.::.|.|:|...|.:.::|:..:|||:|:..
 Worm   294 NKTEPENIKNQSSKDFSTTVRTLQPYLKMKAKMAAYISLTEECRSKYFDSLEKIIALEQDMAVEH 358

  Fly   386 DAEGEKIKDH--MRNIVPILLDANVSNYDKVRIIALYVM-IKNGISEENLTKLFTHAQLSPKDQD 447
            ..|..:|.|.  :..:...:|.| :....::|:|.:::: |.....|:...:|..|..:...:..
 Worm   359 TPEHVRITDSQAVGRLSTFILPA-IPTETRLRLILIFMLTIGKDKDEQYFNRLLHHTDIPESEFQ 422

  Fly   448 MVRNLSCLGINVIADSRKKQYSVPRKERTTESTYQMSRWTPVIKDIMEDCIEDKLDLRHFPFLEG 512
            :::.:.     :..|..:|.....|:....:..:..|||.|.||:::|:..|.:||.|.|. :.|
 Worm   423 IIKRML-----IWRDKTQKSQFQHRRPPPEDERFIASRWDPKIKNLIEEIYERRLDEREFK-VAG 481

  Fly   513 RAQNTNYHAPTSARYGHWHKDKGQAQVKNVPRLIVFIVGGVSMSEMRCAYEVTNAVRNWEVLVGS 577
            :...:::....|||||.....|.:.:.|    :|:|:|||::.||||.|||::... |..|::||
 Worm   482 KKSTSDFRPAASARYGSGLAGKPREKRK----IIIFVVGGITYSEMRVAYELSKKT-NTTVILGS 541

  Fly   578 SHILSPEIFLSDL 590
            ..||:|..||..|
 Worm   542 DEILTPSSFLESL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RopNP_001261404.1 Sec1 40..583 CDD:395791 185/552 (34%)
T07A9.10NP_499918.1 Sec1 31..547 CDD:279352 185/551 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1338
OMA 1 1.010 - - QHG53928
OrthoDB 1 1.010 - - D289675at33208
OrthoFinder 1 1.000 - - FOG0000914
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100816
Panther 1 1.100 - - O PTHR11679
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X527
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.740

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