Protein Alignment RfC4 and holB

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_415617.1
• Gene: holB / 945661
• ECOCYCID: EG11500
• Length: 334
• Species: Escherichia coli
• Alignment Length: 384
• Identity: 83/384 - (21%)
• Similarity: 133/384 - (34%)
• Gaps: 145/384 - (37%)

  Fly    17 PWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILL------- 74
            ||:   || .|:::|.        |..|.:|:.. ::|...||:|....|..|:|.||
E. coli     5 PWL---RP-DFEKLVA--------SYQAGRGHHA-LLIQALPGMGDDALIYALSRYLLCQQPQGH 56

  Fly    75 -----------------GDSYKEAVLELNASNERGIDVVR---NKIKMFAQQKVTLPRGRHKIVI 119
                             .|.|  .:......|..|:|.||   .|:...|:      .|..|:|.
E. coli    57 KSCGHCRGCQLMQAGTHPDYY--TLAPEKGKNTLGVDAVREVTEKLNEHAR------LGGAKVVW 113

  Fly   120 LDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRC------------------- 165
            :.:|..:|:.|..||.:|:|...:.|.|.||....|:::..::|||
E. coli   114 VTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSR 178

  Fly   166 ----------AMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTA-QGD---MRQGLNNL 216
                      |.||.:..|....|| |.:...|:.   .|...:|:.::. .||   :...||:.
E. coli   179 EVTMSQDALLAALRLSAGSPGAALA-LFQGDNWQA---RETLCQALAYSVPSGDWYSLLAALNHE 239

  Fly   217 QSTAQ----------------GFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKL 265
            |:.|:                |...:|..:|        |.|:.|:.:|
E. coli   240 QAPARLHWLATLLMDALKRHHGAAQVTNVDV--------PGLVAELANH---------------- 280

  Fly   266 WKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKL 324
                .||..:.|.:..||            .|||    .:..:.|||..|.:|.||.::
E. coli   281 ----LSPSRLQAILGDVC------------HIRE----QLMSVTGINRELLITDLLLRI 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	83/384 (22%)
holB	NP_415617.1	PRK07993	1..334	CDD:181190	83/384 (22%)