Protein Alignment RfC4 and RFC1

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_014860.1
• Gene: RFC1 / 854392
• SGDID: S000005743
• Length: 861
• Species: Saccharomyces cerevisiae
• Alignment Length: 334
• Identity: 77/334 - (23%)
• Similarity: 129/334 - (38%)
• Gaps: 93/334 - (27%)

  Fly    18 WIEKYRPVKFKEIVGNEDTVARL------------SVFATQGNAPN-----IIIAGPPGVGKTTT 65
            |..||.|...:::.||:.:|.:|            :.|...|...:     .::.||||:||||.
Yeast   298 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTA 362

  Fly    66 IQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLP-----------------RG 113
            ...:|:.|..|     :||.|||:      ||:|..:.|..|..|.                 .|
Yeast   363 AHLVAQELGYD-----ILEQNASD------VRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNG 416

  Fly   114 RHKIVILDEADSMTEGAQQALRRTMEIYSST-TRFALACNTSE-KIIEPIQSRCAMLRFTKLSDA 176
            :|.::|:||.|.|:.|.:..:.:..:....| |...|.||... ..:.|....|..::|.:....
Yeast   417 KHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDAN 481

  Fly   177 QVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPK 241
            .:.::|:.:|..||.....:.::.::.|.:||:||.:|.|.:.:.....|..||:
Yeast   482 SIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTINHENI---------- 536

  Fly   242 LLEEMIHHCAANDIHKAYKILAKLWK--LGYSPEDIIANIFRVCKRINIDEHLKLD--FIREIGI 302
                       |:|.||       |:  :...|.||              .|..||  ...:||.
Yeast   537 -----------NEISKA-------WEKNIALKPFDI--------------AHKMLDGQIYSDIGS 569

  Fly   303 THMKIIDGI 311
            .:..:.|.|
Yeast   570 RNFTLNDKI 578

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	77/334 (23%)
RFC1	NP_014860.1	BRCT	153..230	CDD:469589
		PRK04195	298..762	CDD:235250	77/334 (23%)
		RFC1	621..776	CDD:462507