Protein Alignment RfC4 and RFC2

DIOPT Version :9

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_012602.3
• Gene: RFC2 / 853531
• SGDID: S000003829
• Length: 353
• Species: Saccharomyces cerevisiae
• Alignment Length: 346
• Identity: 123/346 - (35%)
• Similarity: 181/346 - (52%)
• Gaps: 25/346 - (7%)

  Fly     2 PEEPEK----TADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGK 62
            |.:..|    .|:...:..||:|||||....|:...:..|..|.......|.|:::..||||.||
Yeast     7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGK 71

  Fly    63 TTTIQCLARILLG-DSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRH----------K 116
            |:||..|.:.|.| |..|..:||||||:||||.:||.|:|.||:..|:.| .:|          |
Yeast    72 TSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP-SKHDLENYPCPPYK 135

  Fly   117 IVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAK 181
            |:|||||||||..||.|||||||.||..|||.|.||...:||:|:.|||:..||..|..:..:.:
Yeast   136 IIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDR 200

  Fly   182 LIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQG---FGD---ITAENVFKVCD-EPH 239
            |..:::.|.:...:..||.|:..:.||:|:|:..|||.::|   .||   ||:..|.::.. .||
Yeast   201 LRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPH 265

  Fly   240 PKLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFR-VCKRINIDEHLKLDFIREIGIT 303
             .:|.|::....:.|..:..|.:....|.|:|...::..:.. .....|.|.:.|......:..|
Yeast   266 -DILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTT 329

  Fly   304 HMKIIDGINSLLQLTALLAKL 324
            ..::.:|.|..:||..||.|:
Yeast   330 DSRLNNGTNEHIQLLNLLVKI 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	120/328 (37%)
		AAA	31..165	CDD:99707	69/144 (48%)
		Rep_fac_C	254..322	CDD:285713	14/68 (21%)
RFC2	NP_012602.3	rfc	23..353	CDD:234763	120/330 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.810