Protein Alignment RfC4 and RFC5

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_009644.3
• Gene: RFC5 / 852383
• SGDID: S000000291
• Length: 354
• Species: Saccharomyces cerevisiae
• Alignment Length: 240
• Identity: 74/240 - (30%)
• Similarity: 118/240 - (49%)
• Gaps: 39/240 - (16%)

  Fly    18 WIEKYRPVKFKEIVGNEDTVARLSVFATQ-GNAPNIIIAGPPGVGKTTTIQCLARILLGDS-YKE 80
            |::||||.....:..||:....|...:.| .:.|::::.||.|.||.|....|...:.|.. |:.
Yeast     4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRL 68

  Fly    81 AV------------LELN---------------ASNERGIDVVRNKIKMFAQ-QKVTLPRG---- 113
            .:            ||||               .:|:|  .|::..:|..|| ::|.....
Yeast    69 KIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDR--IVIQELLKEVAQMEQVDFQDSKDGL 131

  Fly   114 --RHKIVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDA 176
              |:|.||::||:|:|:.||.|||||||.||...|..:.|::...||.||:|||.::|....||:
Yeast   132 AHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDS 196

  Fly   177 QVLAKLIEVAKWEKLNY-TEDGLEAIVFTAQGDMRQGLNNLQSTA 220
            ::...|.:|...|::.. |:|.|:.|...:.|::|..|..|:|.|
Yeast   197 EISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMA 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	74/240 (31%)
RFC5	NP_009644.3	PRK12402	3..>243	CDD:237090	74/240 (31%)