Protein Alignment RfC4 and RFC3

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_177871.1
• Gene: RFC3 / 844083
• AraportID: AT1G77470
• Length: 369
• Species: Arabidopsis thaliana
• Alignment Length: 316
• Identity: 115/316 - (36%)
• Similarity: 180/316 - (56%)
• Gaps: 10/316 - (3%)

  Fly    17 PWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEA 81
            ||:|||||....::..:.|.:..:.....:...|::::.||||.|||:||..:||.|.|..|:..
plant    40 PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNM 104

  Fly    82 VLELNASNERGIDVVRNKIKMFAQ-QKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSSTT 145
            :||||||::|||||||.:|:.||. |..:|.:...|:|:|||||:||:.||.||||.:|.|:.:|
plant   105 ILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKST 169

  Fly   146 RFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMR 210
            ||||..|...|||..:||||...||..|....:..:|..|.:.|:|..::.||.|:|..:.||||
plant   170 RFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMR 234

  Fly   211 QGLNNLQSTAQGFGDITAENVFKVCDE--------PHPKLLEEMIHHCAANDIHKAYKILAKL-W 266
            :.||.||||.....:||.|...::.:|        |.||.:|::.|........:.||.:::: .
plant   235 KALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQISHWLLNKPFDECYKDVSEIKT 299

  Fly   267 KLGYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLA 322
            :.|.:..||:..|.....:|.:...:::..|.::.....::..|.|..|||.|:::
plant   300 RKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIIS 355

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	115/316 (36%)
RFC3	NP_177871.1	rfc	39..357	CDD:234763	115/316 (36%)