Protein Alignment RfC4 and EMB1968

DIOPT Version :9

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001185061.1
• Gene: EMB1968 / 838771
• AraportID: AT1G21690
• Length: 341
• Species: Arabidopsis thaliana
• Alignment Length: 286
• Identity: 111/286 - (38%)
• Similarity: 160/286 - (55%)
• Gaps: 9/286 - (3%)

  Fly    13 RSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLG-D 76
            :|..||:|||||.:.|::...|:.|..|:......:.|:::..||||.|||||...:|..|.| :
plant     6 QSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPE 70

  Fly    77 SYKEAVLELNASNERGIDVVRNKIKMFA-------QQKVTLPRGRHKIVILDEADSMTEGAQQAL 134
            .||..|||||||::|||:|||.|||.||       .::...|....||:||||||||||.||.||
plant    71 LYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNAL 135

  Fly   135 RRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLE 199
            |||||.||..|||...||...:||||:.||||..||..||:..:..:::.:...|.|:...:.|.
plant   136 RRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALS 200

  Fly   200 AIVFTAQGDMRQGLNNLQSTAQGFGD-ITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILA 263
            .:...:|||:|:.:..|||..:.||. ||:.::..|......:::.::...|.:.|...|.|.:.
plant   201 TLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFTACKSGDFDIANKEVD 265

  Fly   264 KLWKLGYSPEDIIANIFRVCKRINID 289
            .:...||....||..:|.:....:.|
plant   266 NIVAEGYPASQIINQLFDIVAEADSD 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	110/283 (39%)
		AAA	31..165	CDD:99707	70/141 (50%)
		Rep_fac_C	254..322	CDD:285713	9/36 (25%)
EMB1968	NP_001185061.1	PRK12402	11..308	CDD:237090	109/281 (39%)
		AAA	26..166	CDD:99707	70/139 (50%)
		AAA_assoc_2	189..>220	CDD:292811	9/30 (30%)
		Rep_fac_C	256..>309	CDD:285713	9/36 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820