DRSC/TRiP Functional Genomics Resources

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Protein Alignment RfC4 and AT1G14460

DIOPT Version :10

Sequence 1:NP_523915.1 Gene:RfC4 / 38492 FlyBaseID:FBgn0260985 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_172898.2 Gene:AT1G14460 / 838008 AraportID:AT1G14460 Length:1116 Species:Arabidopsis thaliana


Alignment Length:370 Identity:94/370 - (25%)
Similarity:152/370 - (41%) Gaps:66/370 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNI-IIAGPPGVGKTTTI 66
            ||.|:......|.....:||:|:.|.|::|....|..|.....:|...:: :..||.|.|||:|.
plant   409 EEEEEGGSTPESIQSLSQKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTA 473

  Fly    67 QCLARILLGDSYKEA--------------------VLELNASNERGIDVVRNKIKMFAQQKVTL- 110
            :.|:..|..|...|.                    :|||:|..:.|.:.||..:|    :.:|| 
plant   474 RILSAALNCDVVTEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLK----KLLTLA 534

  Fly   111 PRG--RHKIVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTS--EKIIEPIQSRCAMLRFT 171
            |:.  |:|:.::||...:......:|.:.:|  :...:|...|.|:  :.:...|||||....|.
plant   535 PQSSQRYKVFVIDECHLLPSRTWLSLLKFLE--NPLQKFVFVCITTDLDNVPRTIQSRCQKYIFN 597

  Fly   172 KLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFG-----DITAENV 231
            |:.|..::.:|.::|..|.|:.....|:.|...|.|.:|.....|:..:. .|     |:..|.|
plant   598 KVRDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLEQLSL-MGKRITVDLVNELV 661

  Fly   232 FKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKLGYSP-----------EDIIANIFRVCKR 285
            ..|.|:...:|||..:....|..:.||.::|    .||..|           .||||..::.   
plant   662 GVVSDDKLLELLELALSSDTAETVKKARELL----DLGADPILMMSQLASLIMDIIAGAYKA--- 719

  Fly   286 INIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLCIAAEK 330
              :||.....|:....:|..       .|.:|...| ||...|||
plant   720 --LDEKYSEAFLDRRNLTEA-------DLERLKHAL-KLLSEAEK 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RfC4NP_523915.1 PLN03025 16..330 CDD:178596 88/355 (25%)
AT1G14460NP_172898.2 PRK12323 422..773 CDD:481241 90/357 (25%)

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