Protein Alignment RfC4 and EMB2775

DIOPT Version :9

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_198126.1
• Gene: EMB2775 / 832836
• AraportID: AT5G27740
• Length: 354
• Species: Arabidopsis thaliana
• Alignment Length: 345
• Identity: 86/345 - (24%)
• Similarity: 156/345 - (45%)
• Gaps: 46/345 - (13%)

  Fly    18 WIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAV 82
            |::||||....:::.:||...:|....::.:.|:::..||.|.||.|.|..|.:.:.|.|.::..
plant     3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGASAEKVK 67

  Fly    83 LELNA----SNERGID-------------------------VVRNKIKMFAQQKVTLPRGR--HK 116
            :|..|    :..|.||                         :|:..||..|:.:....:|:  :|
plant    68 VENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKKGYK 132

  Fly   117 IVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAK 181
            :::|:|.|.::..||.:||||||.|||:.|..|.||:|.|:.|.|:|||..:|....|..:::..
plant   133 VLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKV 197

  Fly   182 LIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEM 246
            |..|||.|.|...:.....|...:...:|:.:.:|::........|...|....|      .||.
plant   198 LEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMD------WEEY 256

  Fly   247 IHHCAANDI-----HKAYKILAKLWKLGYS---PEDIIANIFRVCKRINIDEHLKLDFIREIGIT 303
            :...|.:.:     .|.:::..|:::|..:   ||.|:..:.....: .:|..|||:........
plant   257 VAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLK-KLDSELKLEVCHWAAYY 320

  Fly   304 HMKIIDGINSLLQLTALLAK 323
            ..::..|..::..:.|.:||
plant   321 EHRMRLGQKAIFHIEAFVAK 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	86/345 (25%)
		AAA	31..165	CDD:99707	48/164 (29%)
		Rep_fac_C	254..322	CDD:285713	12/75 (16%)
EMB2775	NP_198126.1	rfc	2..341	CDD:234763	86/345 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820