Protein Alignment RfC4 and RFC5

DIOPT Version :9

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_031396.1
• Gene: RFC5 / 5985
• HGNCID: 9973
• Length: 340
• Species: Homo sapiens
• Alignment Length: 322
• Identity: 116/322 - (36%)
• Similarity: 187/322 - (58%)
• Gaps: 3/322 - (0%)

  Fly     3 EEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQ 67
            ::.|:.|..|..:|||:|||||....:::.::|.::.:..|..:...|::::.||||.|||:||.
Human     7 KQQEQPAATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTIL 71

  Fly    68 CLARILLGD-SYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQ 131
            ..|:.|..| .:...|||||||::||||::|..|..||..:....:| .|:|||||||:||:.||
Human    72 ACAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQ 135

  Fly   132 QALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTED 196
            .||||.:|.::..|||.|.||...|||..:||||...||..|:...::.:|..|.:.||::.:||
Human   136 NALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVDISED 200

  Fly   197 GLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKI 261
            |::|:|..:.||||:.||.||||...||.:|.|.|:.....|....:..::......|...||:.
Human   201 GMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLNQDFTTAYRN 265

  Fly   262 LAKLWKL-GYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLA 322
            :.:|..| |.:..||:..|.....|::....:::..:.::.....::..|.|..:||::|:|
Human   266 ITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVGTNEKIQLSSLIA 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	113/309 (37%)
		AAA	31..165	CDD:99707	59/134 (44%)
		Rep_fac_C	254..322	CDD:285713	15/68 (22%)
RFC5	NP_031396.1	rfc	16..329	CDD:234763	114/313 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100321
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	5	4.720