Protein Alignment RfC4 and rfc5

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001011112.1
• Gene: rfc5 / 496525
• XenbaseID: XB-GENE-1016200
• Length: 335
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 112/317 - (35%)
• Similarity: 182/317 - (57%)
• Gaps: 3/317 - (0%)

  Fly    15 HLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGD-SY 78
            :|||:|||||....:::.::|.::.:..|.::...|:::..||||.|||:||...|:.|..| .:
 Frog    14 NLPWVEKYRPQTLDDLISHQDILSTIQRFISEDKLPHLLFYGPPGTGKTSTILACAKQLYKDREF 78

  Fly    79 KEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSS 143
            ...|||||||::||||:||..|..||..:....:| .|:|||||||:||:.||.||||.:|.::.
 Frog    79 NSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALRRVIEKFTE 142

  Fly   144 TTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGD 208
            .|||.|.||...|||..:||||...||..||...::.:|..|.|.|.::.:.||::|:|..:.||
 Frog   143 NTRFCLICNYLSKIIPALQSRCTRFRFGPLSPEMMVPRLEHVVKEECVDISPDGMKALVTLSNGD 207

  Fly   209 MRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKL-GYSP 272
            ||:.||.||||...:|.:|.:.|:.....|....:..::......|...|||.:.:|..| |.:.
 Frog   208 MRRSLNILQSTNMAYGKVTEDTVYTCTGHPLRSDIANILDWMLNKDFTSAYKNIMELKTLKGLAL 272

  Fly   273 EDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLCIAAE 329
            .||:..:.....|::....:::..:.::.....::..|.:..:||::|:|...:|.:
 Frog   273 HDILTEVHLYVHRVDFPASVRMHLLIKMADVEYRLASGTSEKIQLSSLIAAFQVARD 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	112/316 (35%)
rfc5	NP_001011112.1	rfc	13..324	CDD:234763	111/310 (36%)