Protein Alignment RfC4 and rfc5

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001003862.1
• Gene: rfc5 / 445385
• ZFINID: ZDB-GENE-040907-1
• Length: 334
• Species: Danio rerio
• Alignment Length: 318
• Identity: 117/318 - (36%)
• Similarity: 183/318 - (57%)
• Gaps: 4/318 - (1%)

  Fly     7 KTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLAR 71
            ||....| :|||:|||||....:::.::|.::.:..|.::...|:::..||||.|||:||...||
Zfish     6 KTQPQAR-NLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGKTSTILACAR 69

  Fly    72 ILLGD-SYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALR 135
            .|..| .:...|||||||::|||||||..|..||..:....:| .|:|||||||:||:.||.|||
Zfish    70 QLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKG-FKLVILDEADAMTQDAQNALR 133

  Fly   136 RTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEA 200
            |.:|.::..|||.|.||...|||..:||||...||..||..|::.:|..|.:.|.::.|.||::|
Zfish   134 RVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQMIPRLEHVIQQESIDITPDGMKA 198

  Fly   201 IVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKL 265
            ||..:.||||:.||.||||...:|.:|.|.|:.....|....:..::......|...||..:.:|
Zfish   199 IVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSDIANILDWALNKDFTTAYNQILEL 263

  Fly   266 WKL-GYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLA 322
            ..| |.:..||:..:..:..|::....:::..:.::.....::..|.:..:||::::|
Zfish   264 KTLKGLALHDILTEVHLLIHRVDFPPSIRMGLLIKLADIEYRLASGTSEKIQLSSMVA 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	114/309 (37%)
rfc5	NP_001003862.1	rfc	12..323	CDD:234763	115/312 (37%)