Protein Alignment RfC4 and rad17

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001002661.2
• Gene: rad17 / 436934
• ZFINID: ZDB-GENE-040718-409
• Length: 666
• Species: Danio rerio
• Alignment Length: 279
• Identity: 51/279 - (18%)
• Similarity: 101/279 - (36%)
• Gaps: 64/279 - (22%)

  Fly     2 PEEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTV------ARLSVFATQGNAPNIIIAGPPGV 60
            |::.|          ||::.:.|....|:..::..|      .|:.:..::.....:::.||.|.
Zfish    74 PDQDE----------PWVDIHAPQSQAELAVHKKKVEEVESWLRVHLDKSKKGGAILLLTGPSGC 128

  Fly    61 GKTTTIQCLARIL-----------LGDSYKEAVL------------ELNASNERGI---DVVR-N 98
            |||.|:|.||:.|           ....||...|            ..:.|::.|:   .::| |
Zfish   129 GKTATVQVLAKELGFQVQEWSNPSTTSQYKTEDLFTQSFDPDSRFNRFHGSSQTGLFQEFLLRAN 193

  Fly    99 KIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQS 163
            |.........|....| ||::::|..:........|...:..:....|..|....|:.:.....|
Zfish   194 KYSRLRMSGETWTEDR-KIILIEEFPNQFYRQPGCLHDILRQFIKCGRCPLVLIVSDSLSGDKNS 257

  Fly   164 RCAM-----------LRFTKLSDAQVLAKLIEVAKWEKLNYT-------EDGLEAIVFTAQGDMR 210
            |...           :.|..::...::..|..:...|.:..:       :..|:.:...:.||:|
Zfish   258 RLLFKDVLQELGIHNISFNPVAPTSMMKVLSRIVTIEAVKSSGRISVPDKAALDLLCSGSSGDIR 322

  Fly   211 QGLNNLQSTAQGFGDITAE 229
            ..:|:||.::  |.|.:.|
Zfish   323 SAINSLQFSS--FTDNSLE 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	49/265 (18%)
rad17	NP_001002661.2	rad24	15..638	CDD:129690	51/279 (18%)