Sequence 1: | NP_523915.1 | Gene: | RfC4 / 38492 | FlyBaseID: | FBgn0260985 | Length: | 331 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005171890.1 | Gene: | rad17 / 436934 | ZFINID: | ZDB-GENE-040718-409 | Length: | 666 | Species: | Danio rerio |
Alignment Length: | 279 | Identity: | 51/279 - (18%) |
---|---|---|---|
Similarity: | 101/279 - (36%) | Gaps: | 64/279 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PEEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTV------ARLSVFATQGNAPNIIIAGPPGV 60
Fly 61 GKTTTIQCLARIL-----------LGDSYKEAVL------------ELNASNERGI---DVVR-N 98
Fly 99 KIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQS 163
Fly 164 RCAM-----------LRFTKLSDAQVLAKLIEVAKWEKLNYT-------EDGLEAIVFTAQGDMR 210
Fly 211 QGLNNLQSTAQGFGDITAE 229 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC4 | NP_523915.1 | PLN03025 | 16..330 | CDD:178596 | 49/265 (18%) |
AAA | 31..165 | CDD:99707 | 31/166 (19%) | ||
Rep_fac_C | 254..322 | CDD:285713 | |||
rad17 | XP_005171890.1 | rad24 | 15..638 | CDD:129690 | 51/279 (18%) |
P-loop_NTPase | 120..>165 | CDD:304359 | 14/44 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |