Sequence 1: | NP_523915.1 | Gene: | RfC4 / 38492 | FlyBaseID: | FBgn0260985 | Length: | 331 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099339.1 | Gene: | Rfc4 / 288003 | RGDID: | 1310142 | Length: | 364 | Species: | Rattus norvegicus |
Alignment Length: | 317 | Identity: | 117/317 - (36%) |
---|---|---|---|
Similarity: | 175/317 - (55%) | Gaps: | 10/317 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLG-DSYK 79
Fly 80 EAVLELNASNERGIDVVRNKIKMFAQQKVTLPR--GR----HKIVILDEADSMTEGAQQALRRTM 138
Fly 139 EIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVF 203
Fly 204 TAQGDMRQGLNNLQSTAQ--GFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLW 266
Fly 267 KLGYSPEDIIANIF-RVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLA 322 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC4 | NP_523915.1 | PLN03025 | 16..330 | CDD:178596 | 117/317 (37%) |
AAA | 31..165 | CDD:99707 | 75/140 (54%) | ||
Rep_fac_C | 254..322 | CDD:285713 | 12/68 (18%) | ||
Rfc4 | NP_001099339.1 | rfc | 39..354 | CDD:234763 | 116/314 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |