Protein Alignment RfC4 and rfc3

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_958865.1
• Gene: rfc3 / 259256
• ZFINID: ZDB-GENE-020809-3
• Length: 356
• Species: Danio rerio
• Alignment Length: 360
• Identity: 96/360 - (26%)
• Similarity: 159/360 - (44%)
• Gaps: 65/360 - (18%)

  Fly    18 WIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEA- 81
            |::||||....::..:::...:|......|:.|::::.||.|.||.|.|.||.|.|.|...::.
Zfish     4 WVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELYGAGVEKLR 68

  Fly    82 -----------------------VLELNASNERGID--VVRNKIKMFAQ-QKVTLPRGRH-KIVI 119
                                   .||:|.|:....|  |::..||..|| |::.....|. |:|:
Zfish    69 IEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQIQSSAQREFKVVL 133

  Fly   120 LDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIE 184
            |.|.|.:|:.||.|||||||.|.:|.|..|.||::.|:|.||:|||..:|....|..:|.:.|..
Zfish   134 LTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCLAVRVPLPSVEEVCSVLSG 198

  Fly   185 VAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVC---------DEPHP 240
            |.:.|.|....:..:.|...:..::|:.|                .:.:.|         |:..|
Zfish   199 VCRKEGLLLPPELAKQIAEKSGRNLRKAL----------------LMCEACRVQQYPFSPDQDIP 247

  Fly   241 KLLEEMIHHCAANDI------HKAYKILAKLWKL---GYSPEDIIANIFRVCKRI-NIDEHLKLD 295
            :...|:.....||.|      .:..::.|:|::|   ..|||.|:..:  |.:.: |.|.|||.:
Zfish   248 ETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCISPEVIMKGL--VTELLSNCDGHLKAE 310

  Fly   296 FIREIGITHMKIIDGINSLLQLTALLAKLCIAAEK 330
            ..:.......::..|..::..|.|.:||.....:|
Zfish   311 VAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKK 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	95/358 (27%)
rfc3	NP_958865.1	rfc	3..345	CDD:234763	95/358 (27%)