Protein Alignment RfC4 and rfc4

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_593121.1
• Gene: rfc4 / 2542790
• PomBaseID: SPAC1687.03C
• Length: 342
• Species: Schizosaccharomyces pombe
• Alignment Length: 310
• Identity: 188/310 - (60%)
• Similarity: 245/310 - (79%)
• Gaps: 1/310 - (0%)

  Fly    16 LPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSYKE 80
            |||:|||||:...:|||||:|:.||.|.|.:||.|:::|:|.||:||||:|.|||..|||.:|||
pombe    21 LPWVEKYRPIVLDDIVGNEETIDRLKVIAKEGNMPHLVISGMPGIGKTTSILCLAHALLGPAYKE 85

  Fly    81 AVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSSTT 145
            .|||||||:|||||||||:||.|||:||.||.|||||:|||||||||.||||||||||||||:||
pombe    86 GVLELNASDERGIDVVRNRIKAFAQKKVILPPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTT 150

  Fly   146 RFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMR 210
            |||||||.|.|||||||||||:||:::|:|.|||.:|:.:.|.||:|||:|||.|::.||:||||
pombe   151 RFALACNQSNKIIEPIQSRCAILRYSRLTDQQVLQRLLNICKAEKVNYTDDGLAALIMTAEGDMR 215

  Fly   211 QGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDI 275
            |.:||||||..|||.:..||||:|.|:|.|..:..|:..|.:.:|..|.:.|..:|.||:|..||
pombe   216 QAVNNLQSTVAGFGLVNGENVFRVADQPSPVAIHAMLTACQSGNIDVALEKLQGIWDLGFSAVDI 280

  Fly   276 IANIFRVCKRI-NIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKL 324
            :.|:|||.|.: :|.|..:|:.::|||.|||.|::|:.:||||:.|:.:|
pombe   281 VTNMFRVVKTMDSIPEFSRLEMLKEIGQTHMIILEGVQTLLQLSGLVCRL 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	188/310 (61%)
rfc4	NP_593121.1	PLN03025	21..332	CDD:178596	188/310 (61%)