Protein Alignment RfC4 and rfc2

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_594540.1
• Gene: rfc2 / 2541908
• PomBaseID: SPAC23D3.02
• Length: 340
• Species: Schizosaccharomyces pombe
• Alignment Length: 331
• Identity: 113/331 - (34%)
• Similarity: 174/331 - (52%)
• Gaps: 11/331 - (3%)

  Fly     6 EKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLA 70
            :||..:.:..:||:|.|||....::...|.||..|.......|.|:::..|.||.|||:||..|:
pombe     9 KKTEQEAKKSIPWVELYRPKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGSPGTGKTSTILALS 73

  Fly    71 RILLGDS-YKEAVLELNASNERGIDVVRNKIKMFAQQKVT-----LPRGRHKIVILDEADSMTEG 129
            |.|.|.. .|..|||||||:||||.::|.|:|.||:..||     .|....||:|||||||||:.
pombe    74 RELFGPQLMKSRVLELNASDERGISIIREKVKSFAKTTVTNKVDGYPCPPFKIIILDEADSMTQD 138

  Fly   130 AQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYT 194
            ||.|||||||.|:..|||.|.||...:||:|:.|||:..||..|.:..::.:|..:|..:.::..
pombe   139 AQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFKPLDNENMVKRLEFIAADQAVSME 203

  Fly   195 EDGLEAIVFTAQGDMRQGLNNLQSTA---QGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIH 256
            ...:.|:|..:.||||:.:..|||.|   || ..||..:|.::.......::..::......::.
pombe   204 PGVVNALVECSGGDMRKAITFLQSAANLHQG-TPITISSVEELAGAVPYNIIRSLLDTAYTKNVS 267

  Fly   257 KAYKILAKLWKLGYSPEDIIANIFRV-CKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTAL 320
            ....:...:...|||...|::.:..| .|...:...:|.....::.....::.||.:..|||..|
pombe   268 NIETLSRDVAAEGYSTGIILSQLHDVLLKEETLSSPVKYKIFMKLSEVDKRLNDGADETLQLLDL 332

  Fly   321 LAKLCI 326
            |:.:.:
pombe   333 LSSISV 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	111/321 (35%)
rfc2	NP_594540.1	rfc	19..337	CDD:234763	111/318 (35%)