Protein Alignment RfC4 and rfc3

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001342879.1
• Gene: rfc3 / 2541493
• PomBaseID: SPAC27E2.10C
• Length: 342
• Species: Schizosaccharomyces pombe
• Alignment Length: 312
• Identity: 103/312 - (33%)
• Similarity: 172/312 - (55%)
• Gaps: 2/312 - (0%)

  Fly    14 SHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSY 78
            |.|||:|||||...:::|.::|.::.|..|.:....|:::..||||.|||:||...||.:.|.:|
pombe    21 STLPWVEKYRPANLEDVVSHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILACARKIYGPNY 85

  Fly    79 KEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSS 143
            :..::|||||::||||.||.:||.||..: .:.....|::||||||:||..||.||||.:|.|:.
pombe    86 RNQLMELNASDDRGIDAVREQIKNFASTR-QIFASTFKMIILDEADAMTLAAQNALRRVIEKYTK 149

  Fly   144 TTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGD 208
            ..||.:.||...||...|||||...||..|...::...:..|.:.|..|...|...|::..::||
pombe   150 NVRFCIICNYINKISPAIQSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRLSKGD 214

  Fly   209 MRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKL-WKLGYSP 272
            ||:.||.||:....:..|....::.....|||..::..:.....::...|:..::.: .:.|.:.
pombe   215 MRKALNILQACHAAYDHIDVSAIYNCVGHPHPSDIDYFLKSIMNDEFVIAFNTISSIKQQKGLAL 279

  Fly   273 EDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKL 324
            :||:..||.....:.|..:.|:..:.::.....::..|.:..:||:|::|.:
pombe   280 QDILTCIFEALDELEIKPNAKIFILDQLATIEHRMSFGCSEKIQLSAMIASI 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	102/310 (33%)
rfc3	NP_001342879.1	rfc	19..331	CDD:234763	103/310 (33%)