Sequence 1: | NP_523915.1 | Gene: | RfC4 / 38492 | FlyBaseID: | FBgn0260985 | Length: | 331 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_500069.1 | Gene: | rfc-2 / 176946 | WormBaseID: | WBGene00004338 | Length: | 334 | Species: | Caenorhabditis elegans |
Alignment Length: | 319 | Identity: | 194/319 - (60%) |
---|---|---|---|
Similarity: | 249/319 - (78%) | Gaps: | 4/319 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 DKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLG 75
Fly 76 DSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEI 140
Fly 141 YSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTA 205
Fly 206 QGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKLGY 270
Fly 271 SPEDIIANIFRVCKRI----NIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLC 325 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC4 | NP_523915.1 | PLN03025 | 16..330 | CDD:178596 | 193/314 (61%) |
AAA | 31..165 | CDD:99707 | 101/133 (76%) | ||
Rep_fac_C | 254..322 | CDD:285713 | 27/71 (38%) | ||
rfc-2 | NP_500069.1 | PLN03025 | 11..325 | CDD:178596 | 193/313 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160159064 | |
Domainoid | 1 | 1.000 | 187 | 1.000 | Domainoid score | I1977 |
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6885 | |
Inparanoid | 1 | 1.050 | 399 | 1.000 | Inparanoid score | I1103 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S368 |
OMA | 1 | 1.010 | - | - | QHG62156 | |
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
OrthoInspector | 1 | 1.000 | - | - | oto18157 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100321 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11669 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1090 |
SonicParanoid | 1 | 1.000 | - | - | X3447 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.750 |