Protein Alignment RfC4 and rfc-2

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_500069.1
• Gene: rfc-2 / 176946
• WormBaseID: WBGene00004338
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 319
• Identity: 194/319 - (60%)
• Similarity: 249/319 - (78%)
• Gaps: 4/319 - (1%)

  Fly    11 DKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLG 75
            :|:...||:|||||....:|||||:.|.||.|...:||.|||:::||||.||||::..|||.|||
 Worm     5 EKQQLAPWVEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALARELLG 69

  Fly    76 DSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEI 140
            |..||||||||||:||||||||::||.|||.|||||.|||||:|||||||||:|||||||||||:
 Worm    70 DKVKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADSMTDGAQQALRRTMEM 134

  Fly   141 YSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTA 205
            |:.|||||||||.|||||||||||||:||:||||..|:|.::.||||.||:||.:.|||||:|||
 Worm   135 YTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAKAEKVNYDDGGLEAILFTA 199

  Fly   206 QGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKLGY 270
            ||||||.|||||:|...:..:..|||.||||||||.|:.:|:|:|......:|.||:.:..:||:
 Worm   200 QGDMRQALNNLQATVNAYELVNKENVLKVCDEPHPDLMIKMLHYCTDRKFFEASKIIHEFHRLGF 264

  Fly   271 SPEDIIANIFRVCKRI----NIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLC 325
            |.:||::.:|||.|.:    |:.|.|::::||:|.:.||:|:.|:.|.|||:.|:|.||
 Worm   265 SSDDIVSTLFRVVKTVELSKNVSEQLRMEYIRQIAMCHMRIVQGLTSKLQLSRLIADLC 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	193/314 (61%)
rfc-2	NP_500069.1	PLN03025	11..325	CDD:178596	193/313 (62%)