Sequence 1: | NP_523915.1 | Gene: | RfC4 / 38492 | FlyBaseID: | FBgn0260985 | Length: | 331 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498521.1 | Gene: | rfc-4 / 175976 | WormBaseID: | WBGene00004340 | Length: | 334 | Species: | Caenorhabditis elegans |
Alignment Length: | 336 | Identity: | 108/336 - (32%) |
---|---|---|---|
Similarity: | 162/336 - (48%) | Gaps: | 52/336 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 EEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQG-NAPNIIIAGPPGVGKTTTI 66
Fly 67 QCLARILLGDS-YKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRH------KIVILDEAD 124
Fly 125 SMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWE 189
Fly 190 KLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQ--GFGDITAENVF-----------KVC------ 235
Fly 236 DEPH-PKLLEEMIHHC-AANDIHKAYKILAKLWKLGYSPEDII--------ANIFRVCKRINID- 289
Fly 290 ---EHLKLDFI 297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC4 | NP_523915.1 | PLN03025 | 16..330 | CDD:178596 | 105/323 (33%) |
AAA | 31..165 | CDD:99707 | 59/141 (42%) | ||
Rep_fac_C | 254..322 | CDD:285713 | 11/56 (20%) | ||
rfc-4 | NP_498521.1 | 44 | 12..329 | CDD:222866 | 105/326 (32%) |
AAA | 32..169 | CDD:99707 | 59/139 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |