DRSC/TRiP Functional Genomics Resources

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Protein Alignment RfC4 and RfC4

DIOPT Version :10

Sequence 1:NP_523915.1 Gene:RfC4 / 38492 FlyBaseID:FBgn0260985 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_308395.5 Gene:RfC4 / 1269746 VectorBaseID:AGAMI1_000370 Length:341 Species:Anopheles gambiae


Alignment Length:340 Identity:259/340 - (76%)
Similarity:299/340 - (87%) Gaps:9/340 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPEE---------PEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAG 56
            ||||         ..|.|:.|:..|||||||||.:|:||||||:|||||.:||:|||||||||||
Mosquito     1 MPEEVASTSSAAGAPKEAEGKKKSLPWIEKYRPQRFEEIVGNEETVARLGIFASQGNAPNIIIAG 65

  Fly    57 PPGVGKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILD 121
            ||||||||||.||||||||.:::||||||||||||||||||:|||||||||||||||||||||||
Mosquito    66 PPGVGKTTTILCLARILLGPNFREAVLELNASNERGIDVVRSKIKMFAQQKVTLPRGRHKIVILD 130

  Fly   122 EADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVA 186
            |||||||||||||||||||||:|||||||||||||||||||||||||||:||||||||||::|:.
Mosquito   131 EADSMTEGAQQALRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDAQVLAKVVEIC 195

  Fly   187 KWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCA 251
            :.|.|:|.|||||||||||||||||.||||||||.|||.|:..|||||||||||.|:::|:.||.
Mosquito   196 QHENLSYDEDGLEAIVFTAQGDMRQALNNLQSTANGFGHISGANVFKVCDEPHPLLVQDMLQHCV 260

  Fly   252 ANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQ 316
            ..||||||||::|||||||:.||||.|:||||:|::::|.|||.||||||.|||||:||:|||||
Mosquito   261 KGDIHKAYKIMSKLWKLGYAAEDIIGNVFRVCRRMDMNEKLKLYFIREIGETHMKIVDGLNSLLQ 325

  Fly   317 LTALLAKLCIAAEKH 331
            ::.|||::|.|:.:|
Mosquito   326 MSGLLARMCEASYEH 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RfC4NP_523915.1 PLN03025 16..330 CDD:178596 251/313 (80%)
RfC4XP_308395.5 None

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