| Sequence 1: | NP_523915.1 | Gene: | RfC4 / 38492 | FlyBaseID: | FBgn0260985 | Length: | 331 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_446238.1 | Gene: | Rfc2 / 116468 | RGDID: | 621198 | Length: | 349 | Species: | Rattus norvegicus |
| Alignment Length: | 325 | Identity: | 239/325 - (73%) |
|---|---|---|---|
| Similarity: | 276/325 - (84%) | Gaps: | 2/325 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 EEPEKTADDKRSH--LPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTT 65
Fly 66 IQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGA 130
Fly 131 QQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTE 195
Fly 196 DGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYK 260
Fly 261 ILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLC 325
Fly 326 325 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RfC4 | NP_523915.1 | PLN03025 | 16..330 | CDD:178596 | 236/310 (76%) |
| AAA | 31..165 | CDD:99707 | 113/133 (85%) | ||
| Rep_fac_C | 254..322 | CDD:285713 | 44/67 (66%) | ||
| Rfc2 | NP_446238.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..27 | 2/10 (20%) | |
| PLN03025 | 31..343 | CDD:178596 | 236/310 (76%) | ||
| AAA | 46..180 | CDD:99707 | 113/133 (85%) | ||
| AAA_assoc_2 | 203..>231 | CDD:292811 | 21/27 (78%) | ||
| Rep_fac_C | 269..337 | CDD:285713 | 44/67 (66%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166340508 | |
| Domainoid | 1 | 1.000 | 201 | 1.000 | Domainoid score | I2921 |
| eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H6885 | |
| Inparanoid | 1 | 1.050 | 487 | 1.000 | Inparanoid score | I1376 |
| OMA | 1 | 1.010 | - | - | QHG62156 | |
| OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000505 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96993 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100321 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11669 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3447 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.770 | |||||