Protein Alignment RfC4 and rfc3

DIOPT Version :10

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: XP_002934079.1
• Gene: rfc3 / 100493161
• XenbaseID: XB-GENE-984444
• Length: 356
• Species: Xenopus tropicalis
• Alignment Length: 355
• Identity: 95/355 - (26%)
• Similarity: 146/355 - (41%)
• Gaps: 69/355 - (19%)

  Fly    18 WIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSY---- 78
            |::||||....::..:::...:|......|:.|::::.||.|.||.|.|.||.|.|.|...
 Frog     4 WVDKYRPSSLSKLDYHKEQAVQLRNLVQCGDFPHLLVFGPSGAGKKTRIMCLLRELYGAGVEKLR 68

  Fly    79 ----------KEAV----------LELNASNERGID--VVRNKIKMFA--QQKVTLPRGRHKIVI 119
                      |:.:          ||:|.|:....|  |::..:|..|  ||..|..:...|:|:
 Frog    69 IEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQLETSTQRDFKVVL 133

  Fly   120 LDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIE 184
            |.|.|.:|:.||.|||||||.|.||.|..|.||::.|:|.||:|||..:|....|..::...|..
 Frog   134 LTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRICAPSVDEICTVLFS 198

  Fly   185 VAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQ---------STAQGFGDITAENVFK------V 234
            |.|.|.|...::....|...:..::|:.|...:         |..|...:...|...|      |
 Frog   199 VCKKEGLILPQELARKIAEKSGRNLRKALLMCEACRVQQYPFSADQDLPETDWEVYVKETANAIV 263

  Fly   235 CDEPHPKLLE------EMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLK 293
            ..:...:|||      |::.||.                    |.:||..........|.|..||
 Frog   264 SQQTPQRLLEVRGRLYELLTHCI--------------------PPEIIIKCLLSELLNNCDGQLK 308

  Fly   294 LDFIREIGITHMKIIDGINSLLQLTALLAK 323
            .|..:.......::..|..::..|.|.:||
 Frog   309 CDVAQMAAYYEHRLQLGSKAIYHLEAFVAK 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	95/355 (27%)
rfc3	XP_002934079.1	PRK12402	3..339	CDD:237090	95/355 (27%)