Protein Alignment RfC4 and rfc2

DIOPT Version :9

• Sequence 1: NP_523915.1
• Gene: RfC4 / 38492
• FlyBaseID: FBgn0260985
• Length: 331
• Species: Drosophila melanogaster
• Sequence 2: NP_001135488.1
• Gene: rfc2 / 100216026
• XenbaseID: XB-GENE-999114
• Length: 345
• Species: Xenopus tropicalis
• Alignment Length: 321
• Identity: 231/321 - (71%)
• Similarity: 270/321 - (84%)
• Gaps: 6/321 - (1%)

  Fly     3 EEPEKTADDKRS------HLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVG 61
            |...|||.....      .|||:|||||:|..||||||:||:||.|||.:||.||||||||||.|
 Frog    12 ESGTKTAAQSAKGLAGTYELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTG 76

  Fly    62 KTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSM 126
            |||:|.||||.|||.:.|:|||||||||:|||||||||||||||||||||:|||||:||||||||
 Frog    77 KTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSM 141

  Fly   127 TEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKL 191
            |:||||||||||||||.|||||||||.|:|||||||||||:||:|||:||||||:|::|.:.|::
 Frog   142 TDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERV 206

  Fly   192 NYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIH 256
            ..|:||||||||||||||||.|||||||..|||.:.:.|||||||||||.|::||:.||...:|.
 Frog   207 QCTDDGLEAIVFTAQGDMRQALNNLQSTFAGFGFVNSTNVFKVCDEPHPLLVKEMLQHCVNANID 271

  Fly   257 KAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREIGITHMKIIDGINSLLQL 317
            :|||::|.||||||||||||.|||||||...:.|:|||:||:|||.|||||.:|:|||||:
 Frog   272 EAYKVVAHLWKLGYSPEDIIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQM 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC4	NP_523915.1	PLN03025	16..330	CDD:178596	227/302 (75%)
		AAA	31..165	CDD:99707	112/133 (84%)
		Rep_fac_C	254..322	CDD:285713	44/64 (69%)
rfc2	NP_001135488.1	PLN03025	31..334	CDD:178596	227/302 (75%)
		AAA	46..180	CDD:99707	112/133 (84%)
		AAA_assoc_2	203..>231	CDD:292811	20/27 (74%)
		Rep_fac_C	269..334	CDD:285713	44/64 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	201	1.000	Domainoid score	I2953
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H6885
Inparanoid	1	1.050	472	1.000	Inparanoid score	I1474
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0000505
OrthoInspector	1	1.000	-	-		oto103690
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X3447
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.160