DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd64 and cnn1b

DIOPT Version :10

Sequence 1:NP_647860.1 Gene:Chd64 / 38490 FlyBaseID:FBgn0035499 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_701038.5 Gene:cnn1b / 572250 ZFINID:ZDB-GENE-091118-54 Length:296 Species:Danio rerio


Alignment Length:183 Identity:70/183 - (38%)
Similarity:106/183 - (57%) Gaps:9/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GFAAEAQRKINSKYSEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLANALQPGSI 74
            |.:||.:.|:..||..:..:|...||..||...:     .:||.|.|||||:||:|.|.|||||:
Zfish    12 GLSAEVKSKLAHKYDPQKEEELRMWISDVTGRKL-----PENFMEGLKDGVLLCELINTLQPGSV 71

  Fly    75 KKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQN---LNSVVICLQSLGRKASNF 136
            :|||.|...:..:|||..|:...:.:|:...|.|::.||:|..|   :.|.:|.|..:.:.....
Zfish    72 RKINNSPQNWHQLENIGNFVRAIQEYGLKPHEIFEANDLFENVNHTQVQSTLIALAGMAKSKGFH 136

  Fly   137 NKPSIGPKEADKNVRNFSDEQLRAGANVISLQYGSNKGATQSGI-NFGNTRHM 188
            :|..||.|.|:|..|.|:.|:|:.|.|:|.||.|:||.|:|.|: ::|..||:
Zfish   137 SKYDIGVKYAEKQQRRFAPEKLKEGRNIIGLQMGTNKFASQKGMTSYGTRRHL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd64NP_647860.1 CH_SF 22..131 CDD:469584 42/111 (38%)
Calponin 165..188 CDD:459803 11/23 (48%)
cnn1bXP_701038.5 CH_SF 26..133 CDD:469584 40/111 (36%)
Calponin 165..189 CDD:459803 11/23 (48%)
Calponin 205..229 CDD:459803
Calponin 244..268 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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