DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd64 and CG5023

DIOPT Version :10

Sequence 1:NP_647860.1 Gene:Chd64 / 38490 FlyBaseID:FBgn0035499 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_650867.1 Gene:CG5023 / 42400 FlyBaseID:FBgn0038774 Length:169 Species:Drosophila melanogaster


Alignment Length:169 Identity:83/169 - (49%)
Similarity:111/169 - (65%) Gaps:8/169 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLANALQPGSIKKINESKMAFKCME 88
            ::|..||.|.|:.||..|.: .||   .:.::||||:.||||||.|.|||:|||.|....|:.||
  Fly     5 NKEQEQEVLNWVFAVIGEKV-PSG---QYEDILKDGIWLCKLANKLAPGSVKKIQERGTNFQLME 65

  Fly    89 NISAFLACAKNFGVPTQETFQSVDLWERQNLNSVVICLQSLGR---KASNFNKPSIGPKEADKNV 150
            ||..|.|..|.:|||.:|.||:.||:||:|:..|.:.|.:|||   |...:..|::|||.||||.
  Fly    66 NIQRFQAAVKKYGVPEEEIFQTADLFERRNIPQVTLSLYALGRITQKHPEYTGPTLGPKMADKNE 130

  Fly   151 RNFSDEQLRAGANVISLQYGSNKGATQSGI-NFGNTRHM 188
            |:|::|||||....::||.|.||||:|:|. ..||||||
  Fly   131 RSFTEEQLRAHEGELNLQMGFNKGASQAGHGGMGNTRHM 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd64NP_647860.1 CH_SF 22..131 CDD:469584 50/106 (47%)
Calponin 165..188 CDD:459803 13/23 (57%)
CG5023NP_650867.1 CH_dMP20-like 4..108 CDD:409056 50/106 (47%)
Calponin 145..169 CDD:459803 13/23 (57%)

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