DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd64 and cnn2

DIOPT Version :10

Sequence 1:NP_647860.1 Gene:Chd64 / 38490 FlyBaseID:FBgn0035499 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_021335293.1 Gene:cnn2 / 406658 ZFINID:ZDB-GENE-030131-542 Length:337 Species:Danio rerio


Alignment Length:223 Identity:74/223 - (33%)
Similarity:115/223 - (51%) Gaps:47/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NRAAKSGFAAEAQRKINSKYSEELAQESLEWIKAVTEEPINTSGDT--DNFFEVLKDGVILCKLA 66
            ||....||:||.:.||..||..:..:|...||:       ||:|.:  |:|.:.||:|||||:|.
Zfish     6 NRGPAYGFSAEVKSKIAQKYDPQREEELRIWIE-------NTTGRSIGDDFQKGLKNGVILCELI 63

  Fly    67 NALQPGSIKKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQNLNSV--------- 122
            |.|||||:||||:|...:..:||::.|:.....:|:...:.|::.||:|..|:..|         
Zfish    64 NKLQPGSVKKINQSSQNWHQLENLTNFIKAITTYGLKPHDIFEANDLFENGNMTQVQTTLLALAG 128

  Fly   123 --------------------------VICLQSLGRKASNFNKPSIGPKEADKNVRNFSDEQLRAG 161
                                      ::|||:  :.....:...||.|.|::..|.|.||:::||
Zfish   129 MVSPVQSYHFTGEQPNLDISDCNYRFLLCLQA--KTKGIHSSVDIGVKYAERQERAFDDEKMKAG 191

  Fly   162 ANVISLQYGSNKGATQSGIN-FGNTRHM 188
            ..||.||.|:||.|:|:|:| :|..||:
Zfish   192 QCVIGLQMGTNKCASQAGMNAYGTRRHL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd64NP_647860.1 CH_SF 22..131 CDD:469584 42/145 (29%)
Calponin 165..188 CDD:459803 12/23 (52%)
cnn2XP_021335293.1 CH_CNN2 26..129 CDD:409132 37/109 (34%)
Calponin 195..219 CDD:459803 12/23 (52%)
Calponin 235..259 CDD:459803
Calponin 274..297 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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