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Protein Alignment Chd64 and cpn-4
DIOPT Version :9
Sequence 1: | NP_647860.1 |
Gene: | Chd64 / 38490 |
FlyBaseID: | FBgn0035499 |
Length: | 188 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_492849.3 |
Gene: | cpn-4 / 172996 |
WormBaseID: | WBGene00000780 |
Length: | 154 |
Species: | Caenorhabditis elegans |
Alignment Length: | 147 |
Identity: | 62/147 - (42%) |
Similarity: | 87/147 - (59%) |
Gaps: | 4/147 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 NRAAKSGFAAEAQRKINSKYSEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLANA 68
:|...:|.|.....|..||:::..|...||||:.:|:|..:.....|||.|.||||..||||.||
Worm 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNA 70
Fly 69 LQPGSIKKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQNLNSVVICLQSLGRKA 133
::.||:|||.:....|.|:|||:.|...|::.||..:||||||||::.::|.||.:.||||.||.
Worm 71 IKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARKV 135
Fly 134 SNFN-KPSIGPKEADKN 149
.... .| ||:..|:
Worm 136 EKLGITP---PKQVSKD 149
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Chd64 | NP_647860.1 |
CH_SF |
22..131 |
CDD:412120 |
51/108 (47%) |
Calponin |
165..187 |
CDD:395325 |
|
cpn-4 | NP_492849.3 |
CH |
33..134 |
CDD:366016 |
49/100 (49%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
113 |
1.000 |
Domainoid score |
I3846 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5199 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D488325at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000270 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
6 | 5.780 |
|
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