DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd64 and cpn-1

DIOPT Version :10

Sequence 1:NP_647860.1 Gene:Chd64 / 38490 FlyBaseID:FBgn0035499 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001369984.1 Gene:cpn-1 / 172660 WormBaseID:WBGene00000777 Length:192 Species:Caenorhabditis elegans


Alignment Length:188 Identity:107/188 - (56%)
Similarity:138/188 - (73%) Gaps:2/188 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASNRAAKSGFAAEAQRKINSKYSEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLA 66
            :|:||.|||.|.|||:||..||.:.||.|.|:|::.||.:..:|.||.||..:|.:||.:||.||
 Worm     6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLA 70

  Fly    67 NALQPGSIKKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQNLNSVVICLQSLGR 131
            |:|:|||:||:|.|.||||.|||||.||..|:.: |...|.||:|||:|.|:.|:|:|||.||.|
 Worm    71 NSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLAR 134

  Fly   132 KA-SNFNKPSIGPKEADKNVRNFSDEQLRAGANVISLQYGSNKGATQSGINFGNTRHM 188
            |: .||.:..:|||||..:.|.::||||:||.|||.||.|||||||.||:|.||||||
 Worm   135 KSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTRHM 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd64NP_647860.1 CH_SF 22..131 CDD:469584 58/108 (54%)
Calponin 165..188 CDD:459803 17/22 (77%)
cpn-1NP_001369984.1 CH_dMP20-like 26..134 CDD:409056 58/108 (54%)
Calponin 169..192 CDD:459803 17/22 (77%)

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