DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd64 and Cnn1

DIOPT Version :10

Sequence 1:NP_647860.1 Gene:Chd64 / 38490 FlyBaseID:FBgn0035499 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_011240690.2 Gene:Cnn1 / 12797 MGIID:104979 Length:306 Species:Mus musculus


Alignment Length:186 Identity:74/186 - (39%)
Similarity:109/186 - (58%) Gaps:10/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NRAAKSGFAAEAQRKINSKYSEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLANA 68
            ||....|.:||.:.|:..||..:..||..|||:.||...|.     :||.:.||||:|||:..|.
Mouse    56 NRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIG-----NNFMDGLKDGIILCEFINK 115

  Fly    69 LQPGSIKKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQN---LNSVVICLQSLG 130
            |||||:||:|||...:..:|||..|:.....:||...:.|::.||:|..|   :.|.::.|.|:.
Mouse   116 LQPGSVKKVNESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMA 180

  Fly   131 RKASNFNKPSIGPKEADKNVRNFSDEQLRAGANVISLQYGSNKGATQSGINFGNTR 186
            :  :..||.::|.|.|:|..|.|..|:||.|.|:|.||.|:||||:|:|:....|:
Mouse   181 K--TKGNKVNVGVKYAEKQERRFEPEKLREGRNIIGLQMGTNKGASQAGMTAPGTK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd64NP_647860.1 CH_SF 22..131 CDD:469584 44/111 (40%)
Calponin 165..188 CDD:459803 11/22 (50%)
Cnn1XP_011240690.2 CH_CNN1 76..183 CDD:409131 42/113 (37%)
Calponin 213..237 CDD:459803 11/22 (50%)
Calponin 252..276 CDD:459803
Blue background indicates that the domain is not in the aligned region.

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