DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ack and Ret

DIOPT Version :10

Sequence 1:NP_647859.1 Gene:Ack / 38489 FlyBaseID:FBgn0028484 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster


Alignment Length:636 Identity:164/636 - (25%)
Similarity:244/636 - (38%) Gaps:208/636 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RKNILSKLIGGGKQPSSKKQSSAARESSQG--------------NGTQLTCLIHEKDITMGLKLG 130
            ||.:..:|   |||..:.....|..||..|              :|........|| :.:...||
  Fly   718 RKMLQRRL---GKQSMTTSSKQALPESGGGDFALMPLQSGFRFESGDAKWEFPREK-LQLDTVLG 778

  Fly   131 DGSFGVVRRGEWSASPAG--KVIPVAVKVLK--SDNLTQPGIIDDFFREVQAMHALDHANLVRLY 191
            :|.||.|.:| ::...||  .:..||||:||  |:::....::.:|    |.:..:.|.|:::|.
  Fly   779 EGEFGQVLKG-FATEIAGLPGITTVAVKMLKKGSNSVEYMALLSEF----QLLQEVSHPNVIKLL 838

  Fly   192 GV-VLSQPMMMITELAERGSLLDTLRK----QCRHTS-------------LTIIWNWSVQIVTGM 238
            |. ..|:..::|.|.|..|||...||.    :|....             ||..|    ||..||
  Fly   839 GACTSSEAPLLIIEYARYGSLRSYLRLSRKIECAGVDFADGVEPVNVKMVLTFAW----QICKGM 899

  Fly   239 AYLEQKRFLHRDLACRNVLLAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESLRFR 303
            |||.:.:.:|||||.||||||.|...||.||||.|.: .|||.|:.....:||..|.|||||...
  Fly   900 AYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDV-YEDDAYLKRSRDRVPVKWMAPESLADH 963

  Fly   304 QFSHASDTWMFGVTLWEMFSFGEDPWVGLNGSQILRKIDREGERLHQPDACPPDVYAMMLQCWDK 368
            .::..||.|.|||..||:.:.|..|:.|: ..|.|..:.:.|.|:.:|:.|...||:::..||..
  Fly   964 VYTSKSDVWSFGVLCWELITLGASPYPGI-APQNLWSLLKTGYRMDRPENCSEAVYSIVRTCWAD 1027

  Fly   369 TPAERPTFAALKEYLASMSPPVMRASRSHHESKGLQIEPGDTIAIIDGRHELKLIKGQNQRTFDI 433
            .|..||:|    ::|||                                 |.:.:.|.|.:..| 
  Fly  1028 EPNGRPSF----KFLAS---------------------------------EFEKLLGNNAKYID- 1054

  Fly   434 GIFPRNLLEQRKVGAAGDVVMRSSVGNGSSSSPFGFCWGGAAAMANGDDRQRKCASMTNQPHAKE 498
                   ||...|                 |:|. :|         |||    .|.:|.:....|
  Fly  1055 -------LETNAV-----------------SNPL-YC---------GDD----SALITTELGEPE 1081

  Fly   499 --RKSTSSKQFAYNKLVNDSATGLQRRNAVKHKGVVVGPQRPPPPQFQQEGILIDISP---DM-R 557
              :...|..:.||:  ::|.||...                    |.::|..:...:|   |: |
  Fly  1082 SLQHLWSPPKIAYD--IHDQATSYD--------------------QSEEEMPVTSTAPPGYDLPR 1124

  Fly   558 PIAEAGTGGAKGAGDSSSLQADSSFCILDAPIDVPTYAGSSGSGDLNVSPTYYNEQPQFDFDPAK 622
            |:.:|...|       ..|:.::.   |..|:::         ...:.:|:|.|           
  Fly  1125 PLLDATANG-------QVLRYEND---LRFPLNI---------RKSSCTPSYSN----------- 1159

  Fly   623 MTASPGRLQPPPYQMPPTYSNTMEFVQKRDLHQQQLATPV-RERDPFDTTN 672
            ||:     :||.....|.||                 .|| |.|...|.||
  Fly  1160 MTS-----EPPATTSLPHYS-----------------VPVKRGRSYLDMTN 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AckNP_647859.1 SAM_TNK-like 14..75 CDD:188938
PTKc_Ack_like 128..385 CDD:270636 99/278 (36%)
UBA_TNK1 1031..1070 CDD:270513
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 104/327 (32%)
Blue background indicates that the domain is not in the aligned region.

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