DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ack and Syk

DIOPT Version :9

Sequence 1:NP_647859.1 Gene:Ack / 38489 FlyBaseID:FBgn0028484 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_001185906.1 Gene:Syk / 20963 MGIID:99515 Length:629 Species:Mus musculus


Alignment Length:253 Identity:98/253 - (38%)
Similarity:145/253 - (57%) Gaps:5/253 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 KLGDGSFGVVRRGEWSASPAGKVIPVAVKVLKSDNLTQPGIIDDFFREVQAMHALDHANLVRLYG 192
            :||.|:||.|::|.:......|.  ||||:||:: ...|.:.|:...|...|..||:..:||:.|
Mouse   370 ELGSGNFGTVKKGYYQMKKVVKT--VAVKILKNE-ANDPALKDELLAEANVMQQLDNPYIVRMIG 431

  Fly   193 VVLSQPMMMITELAERGSLLDTLRKQCRHTSLTIIWNWSVQIVTGMAYLEQKRFLHRDLACRNVL 257
            :..::..|::.|:||.|.|...| :|.||.....|.....|:..||.|||:..|:|||||.||||
Mouse   432 ICEAESWMLVMEMAELGPLNKYL-QQNRHIKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVL 495

  Fly   258 LAAGNKIKIGDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESLRFRQFSHASDTWMFGVTLWEMF 322
            |...:..||.||||.:||..:::.|....|.|.|..|.|||.:.:.:||..||.|.|||.:||.|
Mouse   496 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 560

  Fly   323 SFGEDPWVGLNGSQILRKIDREGERLHQPDACPPDVYAMMLQCWDKTPAERPTFAALK 380
            |:|:.|:.|:.||::...::: |||:..|..||.::|.:|..||......||.|.|::
Mouse   561 SYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFTAVE 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AckNP_647859.1 SAM_TNK-like 14..75 CDD:188938
PTKc_Ack_like 128..385 CDD:270636 98/253 (39%)
UBA_TNK1 1031..1070 CDD:270513
SykNP_001185906.1 SH2_N-SH2_Zap70_Syk_like 12..115 CDD:198191
Interdomain A 107..166
SH2_C-SH2_Syk_like 163..261 CDD:198264
Interdomain B 259..364
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..328
PTKc_Syk 370..625 CDD:133247 98/253 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.