DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit1 and fermt2

DIOPT Version :9

Sequence 1:NP_647858.2 Gene:Fit1 / 38488 FlyBaseID:FBgn0035498 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_005158972.1 Gene:fermt2 / 553051 ZFINID:ZDB-GENE-050506-132 Length:695 Species:Danio rerio


Alignment Length:732 Identity:340/732 - (46%)
Similarity:479/732 - (65%) Gaps:82/732 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDP-ELPKDWSDHALWWPAKNIWLTRTRSTL 69
            :.||.|::.:|||..:.:|||.|:.|||||||.||:. ::.||||||||||..|..||.:|..||
Zfish    15 DGTWELKMHVTDLNRDVSLRVTGEIHIGGVMLKLVEKLDVKKDWSDHALWWEKKKTWLLKTHWTL 79

  Fly    70 DQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDLDIRYPEELSFC-KP 133
            |:.|:|:|:.|.|||.||.||:|:|:::::..:||||.:.|.||..:||..:||:|||||.. ||
Zfish    80 DKYGIQADARLLFTPQHKLLRLQLPNMKHMRVKVNFSDRVFKAVSDICKTFNIRHPEELSLLRKP 144

  Fly   134 LEPEHLKKNFSKLPQRKIPVAEANGIAYVQPALDTNS------FVPITGAYNGSNGSLDRSHNGN 192
            .:|:..||        |:..||...:....|.|...|      ..|:.|:...|.|...::    
Zfish   145 RDPKKKKK--------KLEDAEEETLELEGPLLTPGSASDVLYIGPVKGSIYSSPGLYSKT---- 197

  Fly   193 LLCAPASPYTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGD--LQEN----LAMSPRSPS 251
                    .|....:..|:|: |||..|               |||  |.|.    ||:|....|
Zfish   198 --------MTPTYDSRDGSPL-SPTSAW---------------FGDSPLSEGNPSILAVSQPITS 238

  Fly   252 PDVRARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFTFFDLNPKYDQVRINQL 316
            ||:..::.:|:|.::||::|.||||||.|:|||.|:|.:.|.|||||.:|||||||||.:|:|||
Zfish   239 PDILVKMYKPQSLLDKAKINQGWLDSSRSLMEQDVKENEVLLLRFKYHSFFDLNPKYDAIRVNQL 303

  Fly   317 YEQAKWSILNEELEPTEEETLMFAALQFQVNHQTDLHPPGIDSGIDTSSQETGGEDDIDSALNEL 381
            ||||||:||.||:|.||||.:||||||:.:|   .|.....|:.::.|.:|.   |::|:||::|
Zfish   304 YEQAKWAILLEEIECTEEEMMMFAALQYHIN---KLSIMSSDNHMNNSEKEV---DEVDAALSDL 362

  Fly   382 QITLEGPGGGKDQGNITRIPELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDESRRGAP 446
            :|||||.......|:||.||||:||:|..||::.||||||:|:.|::|:.:..|||::|: .|.|
Zfish   363 EITLEGGKTSNTLGDITSIPELADYVKVFKPKKLTLKGYKQYWCTFKDITISCYKSREEA-HGTP 426

  Fly   447 TISINLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWMAACRLAAKGRS 511
            ...:||:|||||||||::..||.|:|.:|  :.:|.| |:|:|||.|:|||:||||||||:||::
Zfish   427 AHQMNLRGCEVTPDVNISGQKFNIKLLIP--VADGMN-EIWLRCDTEKQYAQWMAACRLASKGKT 488

  Fly   512 LADSSYDSEVSSIRSLLQMQKPAQGAPLTVNPRSVEPMD-------YLSPKMMRKLSSK------ 563
            :|||||:.||.:|.|.|:||.      :..:|:.:||:.       .:||:.::|..:|      
Zfish   489 MADSSYNLEVQNILSFLKMQH------MNPDPQIIEPITTDINPECLVSPRYLKKYKNKQPGFVR 547

  Fly   564 --AVQRILEAHANVRQLSLMDAKMKYIQAWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMD 626
              ...||||||.||.|:||::|||::||||||||:||:|.|:.||.|.||:||:|:..||::|||
Zfish   548 DLISARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFLAKFQGGKKDELIGITYNRLIRMD 612

  Fly   627 LNTGDHIKTWRYNTMKAWNVNWGIKCMMIQLQDE-NIVFSVQSADCKVVHEFIGGYIFMSMRSKE 690
            ..|||.|||||::.||.|||||.||.:.::..|| ::.|.....||||||||||||||:|.|:|:
Zfish   613 AGTGDAIKTWRFSNMKQWNVNWEIKMVTVEFADEPSLAFICAEVDCKVVHEFIGGYIFLSTRAKD 677

  Fly   691 NNQTLNEEMFHKLTGGW 707
            .|::|:||||:|||.||
Zfish   678 QNESLDEEMFYKLTSGW 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit1NP_647858.2 FERM_B-lobe 305..>348 CDD:298919 30/42 (71%)
PH_fermitin 401..529 CDD:269943 69/127 (54%)
PH 401..508 CDD:278594 58/106 (55%)
FERM_M <538..602 CDD:278785 32/78 (41%)
FERM_C_fermitin 596..686 CDD:270026 51/90 (57%)
fermt2XP_005158972.1 FERM_B-lobe 292..>335 CDD:298919 31/45 (69%)
PH_fermitin 382..506 CDD:269943 69/127 (54%)
PH 390..485 CDD:278594 52/98 (53%)
FERM_M <524..588 CDD:278785 29/63 (46%)
PH-like 582..673 CDD:302622 51/90 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591975
Domainoid 1 1.000 297 1.000 Domainoid score I1426
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4976
Inparanoid 1 1.050 630 1.000 Inparanoid score I825
OMA 1 1.010 - - QHG48345
OrthoDB 1 1.010 - - D132272at33208
OrthoFinder 1 1.000 - - FOG0001455
OrthoInspector 1 1.000 - - mtm6417
orthoMCL 1 0.900 - - OOG6_103097
Panther 1 1.100 - - O PTHR16160
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2884
SonicParanoid 1 1.000 - - X911
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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