DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit1 and Fit2

DIOPT Version :10

Sequence 1:NP_647858.2 Gene:Fit1 / 38488 FlyBaseID:FBgn0035498 Length:708 Species:Drosophila melanogaster
Sequence 2:NP_648947.1 Gene:Fit2 / 39907 FlyBaseID:FBgn0036688 Length:715 Species:Drosophila melanogaster


Alignment Length:716 Identity:541/716 - (75%)
Similarity:624/716 - (87%) Gaps:9/716 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIHVGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDPELPKDWSDHALWWPAKNIWLTRT 65
            |||||||:|||||.||||.:|||:||:|||||||:||.|||||.|||||||||||||:|:||:||
  Fly     1 MIHVGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVDPENPKDWSDHALWWPARNVWLSRT 65

  Fly    66 RSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDLDIRYPEELSF 130
            :.||||.|||:||.||||||||.||||:|||||||.||::|.|||.|||:|||.||||||||||.
  Fly    66 KLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDYSVKTFSAVVNLCKQLDIRYPEELSL 130

  Fly   131 CKPLEPEHLKKNFSKLP-QRKIPVAEANGIAYVQPALDTNSFVPITGAYN---GSNGSLDR-SHN 190
            |||||.||||:||:::| |:::|:||.:|..|:|||.||||||||:.:::   ||.||||: |..
  Fly   131 CKPLEAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKPSAP 195

  Fly   191 GNLLCAPASPYTRRAATAPGTPISSPTGTWKHNSTGYASYD-SNSSFGDLQENLAMSPRSPSPDV 254
            |:..|||.||:..| |.:|...:|...||||.:..|||:|| |:||.||.|||||.||.:|..||
  Fly   196 GSFFCAPLSPHNHR-ARSPVRTVSPFPGTWKQSQLGYATYDSSSSSLGDFQENLASSPPTPCADV 259

  Fly   255 RARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFTFFDLNPKYDQVRINQLYEQ 319
            ||..:||||.|||||||||||||||||||||:|||||||||||||||||||||.|||||||||||
  Fly   260 RALQLRPKSLVEKARLNVGWLDSSLSIMEQGIREYDTLCLRFKYFTFFDLNPKCDQVRINQLYEQ 324

  Fly   320 AKWSILNEELEPTEEETLMFAALQFQVNHQTDLHPPG--IDSGIDTSSQETGGEDDIDSALNELQ 382
            ||||:|||||:.||||:||||||||||||..|..|.|  :||||:|||||...||:|||||.|||
  Fly   325 AKWSVLNEELDCTEEESLMFAALQFQVNHHVDHTPQGAAVDSGIETSSQENDNEDEIDSALKELQ 389

  Fly   383 ITLEGPGGGKDQGNITRIPELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDESRRGAPT 447
            ||||||..|.|..||||||||||||::||||||||:|||||:||||||||||:|:.::|||.||.
  Fly   390 ITLEGPDYGGDSRNITRIPELSDYLRYLKPQRFTLRGYKRYYFTYRDLHLHLFKNAEDSRRVAPA 454

  Fly   448 ISINLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWMAACRLAAKGRSL 512
            ||||||||||||||||:|||:||||||..:..:|.||||||||:||:||||||||||||||||||
  Fly   455 ISINLKGCEVTPDVNLSQGKYAIRLEVSPDGGHGINSEVWVRCENEQQYAKWMAACRLAAKGRSL 519

  Fly   513 ADSSYDSEVSSIRSLLQMQKPAQGAPLTVNPRSVEPMDYLSPKMMRKLSSKAVQRILEAHANVRQ 577
            |||||:|||.||.||||||:||.|..:.::|||||.:||||||::||||:||||||||||||||:
  Fly   520 ADSSYESEVDSILSLLQMQRPAHGVHVNIDPRSVEAVDYLSPKIIRKLSNKAVQRILEAHANVRE 584

  Fly   578 LSLMDAKMKYIQAWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMK 642
            |:.:|:|:||||||:|||||||:|||||||||:||||||||:||||||||::|||||||||||||
  Fly   585 LNALDSKLKYIQAWRSLPDFGVSLFIIKFDGHRKEELLGVAHNRIMRMDLSSGDHIKTWRYNTMK 649

  Fly   643 AWNVNWGIKCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMFHKLTGGW 707
            ||||||.|||||||.:|||:|||..||||||||||||||||||||||:.|||||||:||||||||
  Fly   650 AWNVNWNIKCMMIQFEDENVVFSCHSADCKVVHEFIGGYIFMSMRSKDTNQTLNEELFHKLTGGW 714

  Fly   708 S 708
            |
  Fly   715 S 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit1NP_647858.2 FERM_F0_kindlins 8..86 CDD:340615 60/77 (78%)
FERM_F1_kindlins 87..299 CDD:340616 142/217 (65%)
B41 <274..>363 CDD:214604 76/90 (84%)
PH_fermitin 401..529 CDD:269943 102/127 (80%)
FERM_M <490..602 CDD:459788 85/111 (77%)
FERM_C_fermitin 596..686 CDD:270026 78/89 (88%)
Fit2NP_648947.1 FERM_F0_kindlins 8..86 CDD:340615 60/77 (78%)
FERM_F1_kindlins 87..304 CDD:340616 142/217 (65%)
B41 259..>351 CDD:214604 81/91 (89%)
PH_fermitin 408..536 CDD:269943 102/127 (80%)
FERM_M <507..609 CDD:459788 77/101 (76%)
FERM_C_fermitin 603..693 CDD:270026 78/89 (88%)

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