DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit1 and fermt1

DIOPT Version :9

Sequence 1:NP_647858.2 Gene:Fit1 / 38488 FlyBaseID:FBgn0035498 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_002939191.1 Gene:fermt1 / 100492800 XenbaseID:XB-GENE-5960335 Length:675 Species:Xenopus tropicalis


Alignment Length:725 Identity:320/725 - (44%)
Similarity:464/725 - (64%) Gaps:71/725 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIH---VGENTWNLRILITDLQ----VEKTLRVKGDQHIGGVMLNLVDP-ELPKDWSDHALWWPA 57
            |.|   ||..:|.|.:.:.:..    .:..:||.||.|||||||.||:. .:.:||||:||||..
 Frog     1 MTHTAAVGPASWELCVKVEEQNGAEPQDVKIRVSGDLHIGGVMLRLVEKISVSRDWSDYALWWEQ 65

  Fly    58 KNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDLDI 122
            ||.||.:|..|||:.|||:::.|.|||.||.||:::|:::.:..:|:|||..|.|||.:||.|:|
 Frog    66 KNCWLLKTHWTLDKYGVQANAKLFFTPQHKLLRLRLPNMKLVRLKVSFSAVVFKAVVEICKILNI 130

  Fly   123 RYPEELSFCKPLEPEHLKKNFSKLPQRKIPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDR 187
            |.|||||..||.: :::||...|          .|....:...::..|  |     |.::|||  
 Frog   131 RRPEELSLIKPSD-DYVKKKKKK----------ENKDTVLDEVINLES--P-----NSNSGSL-- 175

  Fly   188 SHNGNLLCAPASPYTRRAATAP------GTPISSPTGTWKHNSTGYASYDSNSSFGDLQENLAMS 246
                      |||........|      ||| :|.|.||..:|. .|....|.        ||.|
 Frog   176 ----------ASPGLYSKTMTPMYDPVNGTP-ASATITWFTDSP-LAEQSCNI--------LAAS 220

  Fly   247 PRSPSPDVRARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFTFFDLNPKYDQV 311
            ..:.|.::.|::.:|::.::|.||:.||||||.|:||||.:|.|.|.|||||::|||||||||.|
 Frog   221 QPNASLEILAQMYQPRTLIDKTRLSSGWLDSSRSLMEQGFQEDDHLLLRFKYYSFFDLNPKYDAV 285

  Fly   312 RINQLYEQAKWSILNEELEPTEEETLMFAALQFQVNHQTDLHPPGIDSGIDTSSQETGGEDDIDS 376
            |||||:|||:|::|.||::.||||.|||||||:.: |:..|.....:|..|      |..|:|::
 Frog   286 RINQLFEQARWALLLEEIDCTEEEMLMFAALQYHI-HKVSLSADAFESTTD------GETDEIEA 343

  Fly   377 ALNELQITLEGPGGGKDQGNITRIPELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDES 441
            ||:.|::.|||....:...:||.||:|:|.||..:|::.|||..|:|:|.::|..:..:|:: |:
 Frog   344 ALSNLEVALEGGKTDRLLEDITDIPKLADNLKLFRPKKLTLKASKQYWFVFKDTSISYFKNK-EA 407

  Fly   442 RRGAPTISINLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWMAACRLA 506
            ..|.|...:||:|||:.||||:||.||.|:|.:|  ...|.| |||::||||.|||||||||.||
 Frog   408 AHGEPVEKLNLRGCEIVPDVNVAQKKFGIKLLIP--FAEGMN-EVWLKCDNESQYAKWMAACVLA 469

  Fly   507 AKGRSLADSSYDSEVSSIRSLLQMQ--KPAQGAPLTVNPRSVEPMDYLSPKMMRKLSSKAV-QRI 568
            :||:::|||||..||.:|.|.|:::  ......|..:....::|..::||:..:|..||.: .||
 Frog   470 SKGKTMADSSYRPEVHNILSFLKLKNTNTTSQVPSNIENVDIKPECFVSPRYSKKYKSKQLAARI 534

  Fly   569 LEAHANVRQLSLMDAKMKYIQAWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNTGDHI 633
            |||..|:.|:||::||:::||||||||:||:..:|::|.|.||::||||::||::|:|:.|.|.:
 Frog   535 LEAQQNIAQMSLVEAKLRFIQAWQSLPEFGLAYYIVRFRGSKKDDLLGVSHNRLIRIDIATKDPV 599

  Fly   634 KTWRYNTMKAWNVNWGIKCMMIQLQDEN--IVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLN 696
            .|||:..||.|||||..:.:.|:. |:|  |.|:.|||:||:|||:||||||:|.|||:.|:||:
 Frog   600 TTWRFANMKQWNVNWEKREVAIEF-DQNIAIAFTSQSANCKIVHEYIGGYIFLSTRSKDQNETLD 663

  Fly   697 EEMFHKLTGG 706
            |::|||||||
 Frog   664 EDLFHKLTGG 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit1NP_647858.2 FERM_B-lobe 305..>348 CDD:298919 29/42 (69%)
PH_fermitin 401..529 CDD:269943 64/127 (50%)
PH 401..508 CDD:278594 53/106 (50%)
FERM_M <538..602 CDD:278785 28/64 (44%)
FERM_C_fermitin 596..686 CDD:270026 46/91 (51%)
fermt1XP_002939191.1 FERM_F0_KIND1 11..94 CDD:340700 38/82 (46%)
Ubiquitin_like_fold 95..273 CDD:391949 75/217 (35%)
B41 <238..>321 CDD:214604 55/83 (66%)
PH_fermitin 368..492 CDD:269943 64/127 (50%)
FERM_M <510..568 CDD:366056 27/57 (47%)
FERM_C_fermitin 562..653 CDD:270026 46/91 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I1456
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 633 1.000 Inparanoid score I827
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132272at33208
OrthoFinder 1 1.000 - - FOG0001455
OrthoInspector 1 1.000 - - mtm9477
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2884
SonicParanoid 1 1.000 - - X911
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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