DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fit1 and fermt2

DIOPT Version :10

Sequence 1:NP_647858.2 Gene:Fit1 / 38488 FlyBaseID:FBgn0035498 Length:708 Species:Drosophila melanogaster
Sequence 2:XP_031747907.1 Gene:fermt2 / 100124904 XenbaseID:XB-GENE-1012566 Length:721 Species:Xenopus tropicalis


Alignment Length:729 Identity:348/729 - (47%)
Similarity:473/729 - (64%) Gaps:73/729 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVDP-ELPKDWSDHALWWPAKNIWLTRTRSTL 69
            :.||.|.|.:|||..:.||||.|:.|||||||.||:. ::.||||||||||..|..||.:|..||
 Frog    38 DGTWELNIHVTDLNRDVTLRVTGEVHIGGVMLKLVEKLDVKKDWSDHALWWEKKKTWLLKTHWTL 102

  Fly    70 DQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNFSAKTFGAVVSLCKDLDIRYPEELSFC-KP 133
            |:.|:|:|:.|.|||.||.||:|:|:::|:..:||||.|.|.||..:||..:||:|||||.. ||
 Frog   103 DKYGIQADAKLQFTPQHKLLRLQLPNMKYVKVKVNFSDKVFKAVSDICKTFNIRHPEELSLLRKP 167

  Fly   134 LEPEHLKKNFSKLPQRKI-PVAEANGIAYVQPALDTNS------FVPITGAYNGSNGSLDRSHNG 191
            .:|...||       :|| ...|.|.:....|.|...|      ..|:.|:...|.|...::   
 Frog   168 RDPTKKKK-------KKIDDQCEDNILELEGPLLTPGSGTDVLYIGPVKGSIYSSPGLYSKT--- 222

  Fly   192 NLLCAPASPYTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGD--LQEN----LAMSPRSP 250
                     .|....:..|:|: |||..|               |||  |.|.    ||:|....
 Frog   223 ---------MTPTYDSRDGSPL-SPTSAW---------------FGDSALSEGNPGILAVSQPIT 262

  Fly   251 SPDVRARLVRPKSRVEKARLNVGWLDSSLSIMEQGVREYDTLCLRFKYFTFFDLNPKYDQVRINQ 315
            ||::.|::.:|::.::||::|.|||||:.|:|||.|:|.|.|.|||||::|||||||||.:||||
 Frog   263 SPEILAKMYKPQTLLDKAKINQGWLDSARSLMEQDVKENDALLLRFKYYSFFDLNPKYDAIRINQ 327

  Fly   316 LYEQAKWSILNEELEPTEEETLMFAALQFQVNHQTDLHPPGIDSGIDTSSQETGGEDDIDSALNE 380
            |||||||:||.||:|.||||.:||||||:.:|   .|.....::..:.|.:|.   |::|:||::
 Frog   328 LYEQAKWAILLEEIECTEEEMMMFAALQYHIN---KLSVMSSENHYNNSDKEV---DEVDAALSD 386

  Fly   381 LQITLEGPGGGKDQGNITRIPELSDYLKFLKPQRFTLKGYKRYFFTYRDLHLHLYKSQDESRRGA 445
            |:|||||.......|:||.||||:||||..||::.||||||:|:.|::|..:..|||::|| .|.
 Frog   387 LEITLEGGKTSTILGDITSIPELTDYLKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES-NGT 450

  Fly   446 PTISINLKGCEVTPDVNLAQGKFAIRLEVPSEIRNGPNSEVWVRCDNEEQYAKWMAACRLAAKGR 510
            |...:||:|||||||||::..||.|:|.:|  :..|.| |:|:||:||:|||.||||||||:||:
 Frog   451 PAHQMNLRGCEVTPDVNISGQKFNIKLLIP--VAEGMN-EIWLRCENEKQYAHWMAACRLASKGK 512

  Fly   511 SLADSSYDSEVSSIRSLLQMQ---KPAQGAPLTVNPRSVEPMDYLSPKMMRKLSSK--------A 564
            ::|||||:.||.:|.|.|:||   ...|..|..|| ..:.|...:||:.::|..:|        .
 Frog   513 TMADSSYNLEVQNILSFLKMQHLNPDPQFIPDQVN-SDINPECVVSPRYLKKYKNKQPGYVRDLI 576

  Fly   565 VQRILEAHANVRQLSLMDAKMKYIQAWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNT 629
            ..||||||.||.|:||::|||::||||||||:||:|.|:.:|.|.|||||:|:..||::|||..|
 Frog   577 TARILEAHQNVAQMSLIEAKMRFIQAWQSLPEFGITHFLARFQGGKKEELIGITYNRLIRMDAGT 641

  Fly   630 GDHIKTWRYNTMKAWNVNWGIKCMMIQLQDE-NIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQ 693
            ||.|||||::.||.|||||.||.:.::..|| .:.|.....||||||||||||||:|.|:|:.|:
 Frog   642 GDAIKTWRFSNMKQWNVNWEIKMVTVEFADEMRLSFICAEVDCKVVHEFIGGYIFLSTRAKDQNE 706

  Fly   694 TLNEEMFHKLTGGW 707
            :|:||||.|||.||
 Frog   707 SLDEEMFFKLTSGW 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fit1NP_647858.2 FERM_F0_kindlins 8..86 CDD:340615 45/78 (58%)
FERM_F1_kindlins 87..299 CDD:340616 78/225 (35%)
B41 <274..>363 CDD:214604 54/88 (61%)
PH_fermitin 401..529 CDD:269943 71/127 (56%)
FERM_M <490..602 CDD:459788 62/122 (51%)
FERM_C_fermitin 596..686 CDD:270026 51/90 (57%)
fermt2XP_031747907.1 FERM_F0_KIND2 40..119 CDD:340701 45/78 (58%)
FERM_F1_KIND2 120..311 CDD:340704 78/225 (35%)
B41 <278..>358 CDD:214604 56/79 (71%)
PH_fermitin 407..531 CDD:269943 71/127 (56%)
FERM_M <489..614 CDD:459788 64/125 (51%)
PH-like 608..699 CDD:473070 51/90 (57%)

Return to query results.
Submit another query.