DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14995 and U2A'

DIOPT Version :10

Sequence 1:NP_728935.1 Gene:CG14995 / 38487 FlyBaseID:FBgn0035497 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_172447.1 Gene:U2A' / 837505 AraportID:AT1G09760 Length:249 Species:Arabidopsis thaliana


Alignment Length:375 Identity:83/375 - (22%)
Similarity:140/375 - (37%) Gaps:105/375 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HKSDKKLISKLSSSSFGRRQSVCPRPRR----SSSAIVCAAKELHFNKDGTTIRRLQAGVNKLAD 80
            :|..||.|... ||||.|.:|     ||    |||.:...:.|:..:.:    .::...|.|.|.
plant    44 NKGKKKQIPTW-SSSFVRNRS-----RRIGVVSSSLVASPSGEIALSSE----EKVYNVVLKQAA 98

  Fly    81 LVGVTLG--------PKGRNVVLESKYGSPRIVNDGVTVAREVELE-DPVENIGAKLV----RQA 132
            ||...|.        .|.::|||.   ||..::.:......||..| .....:|..|:    |:|
plant    99 LVNKQLRSSSYDLDVKKPQDVVLP---GSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKA 160

  Fly   133 -------AAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTEL-KKM 189
                   ..:|::|. ||...|.:                 .|:.:.|.     :|.:.:| :..
plant   161 IWAIYVWCRRTDELV-DGPNASHI-----------------TPMALDRW-----EARLEDLFRGR 202

  Fly   190 SKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYI 254
            ..::.|:.|||..|....:.....:|| |.|         .::..||...|        ||..|:
plant   203 PFDMLDAALADTVARYPVDIQPFRDMI-EGM---------RMDLKKSRYQN--------FDDLYL 249

  Fly   255 SPYFVTDS--------------EKMSVE--FDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILI 303
            ..|:|..:              .|.:.|  ::....|.:..::||....||  |||.||  .:.:
plant   250 YCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVG--EDARRG--RVYL 310

  Fly   304 IAEDIEQEAL------ATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIA 347
            ..:::.|..|      |..|.:|.|..:|:...||..|.:...:.:.:::
plant   311 PQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14995NP_728935.1 leucine-rich repeat 21..42 CDD:275378 10/20 (50%)
leucine-rich repeat 43..64 CDD:275378 6/24 (25%)
PPP1R42 <44..131 CDD:455733 23/103 (22%)
leucine-rich repeat 65..89 CDD:275378 6/31 (19%)
leucine-rich repeat 90..118 CDD:275378 7/27 (26%)
dnaA 211..>389 CDD:455861 34/159 (21%)
U2A'NP_172447.1 LRR_9 1..175 CDD:405295 36/143 (25%)
leucine-rich repeat 22..39 CDD:275378
leucine-rich repeat 40..65 CDD:275378 10/26 (38%)
leucine-rich repeat 66..89 CDD:275378 4/26 (15%)
leucine-rich repeat 90..114 CDD:275378 6/23 (26%)
leucine-rich repeat 115..126 CDD:275378 6/13 (46%)
Blue background indicates that the domain is not in the aligned region.

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