DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14995 and lrtomt

DIOPT Version :10

Sequence 1:NP_728935.1 Gene:CG14995 / 38487 FlyBaseID:FBgn0035497 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_012812100.1 Gene:lrtomt / 394652 XenbaseID:XB-GENE-6257736 Length:211 Species:Xenopus tropicalis


Alignment Length:166 Identity:45/166 - (27%)
Similarity:73/166 - (43%) Gaps:28/166 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRLTEEMVIARAKQSDLSLIKKLNCWGSD----LSDVSIIKRMRGVEVLALSVNKISTL-STFE 60
            :.|.....::::|.:.:.:.:..|..:|..    |||.   .::|.::   ||.|.:||: |...
 Frog    61 LKRCENGKLLSQALRLNNNTLTDLKGFGETAEKLLSDP---PQLRWID---LSFNDLSTIDSVLP 119

  Fly    61 DCTKLQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERAGPNYRSIVLRALPNLKKLDNV 125
            ....|..|.|..|||..::::..|..||:|::|.|..||.....|  ||..:|..||.||.||..
 Frog   120 KYRNLSVLNLHSNSIRQLSQVDKLAALPNLKSLTLHGNPIEGERG--YRCYILSVLPQLKTLDFS 182

  Fly   126 EVTQQEVEDALRGGGVAAPEDEVYEDAYQQQQQSRR 161
            .||:|               |.|..|.:::.....|
 Frog   183 AVTKQ---------------DRVTADVWRRMNMKPR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14995NP_728935.1 leucine-rich repeat 21..42 CDD:275378 5/24 (21%)
leucine-rich repeat 43..64 CDD:275378 6/21 (29%)
PPP1R42 <44..131 CDD:455733 32/87 (37%)
leucine-rich repeat 65..89 CDD:275378 8/23 (35%)
leucine-rich repeat 90..118 CDD:275378 10/27 (37%)
dnaA 211..>389 CDD:455861
lrtomtXP_012812100.1 LRR <72..>182 CDD:443914 37/117 (32%)
leucine-rich repeat 72..100 CDD:275378 6/30 (20%)
leucine-rich repeat 101..123 CDD:275378 7/24 (29%)
leucine-rich repeat 124..148 CDD:275378 8/23 (35%)
leucine-rich repeat 149..175 CDD:275378 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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