Protein Alignment CG14995 and U2A

DIOPT Version :10

• Sequence 1: NP_728935.1
• Gene: CG14995 / 38487
• FlyBaseID: FBgn0035497
• Length: 454
• Species: Drosophila melanogaster
• Sequence 2: NP_610315.1
• Gene: U2A / 35713
• FlyBaseID: FBgn0033210
• Length: 265
• Species: Drosophila melanogaster
• Alignment Length: 241
• Identity: 53/241 - (21%)
• Similarity: 91/241 - (37%)
• Gaps: 74/241 - (30%)

  Fly     1 MSRLTEEMV------IARAKQSDLSL----IKKLNCWGS--------DLSDVSIIK-----RMRG 42
            |.:||.|::      |...::.:|.|    |.::...|:        ||||..:.|     .:..
  Fly     1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPR 65

  Fly    43 VEVLALSVNKISTLS--TFEDCTKLQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERAG 105
            ::.|.|:.|:|..:|  ..|....|..:.|..|::.:::::..|.....|..:.|..||...:
  Fly    66 LKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTK-- 128

  Fly   106 PNYRSIVLRALPNLKKLDNVEVTQQEVE------------DALR--------------------- 137
            ||||..:....|.|:.||..::.|::.:            |.|:
  Fly   129 PNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSKMSAAAAIAAEAGNG 193

  Fly   138 ------GGGVAAPED-----EVYEDAYQQQQQSRRSSPQQILQQQQ 172
                  ||.:|.|:|     |..:.|....:..|.|   ||||..|
  Fly   194 KGRGSEGGRLANPQDMQRIREAIKRASSLAEVERLS---QILQSGQ 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG14995	NP_728935.1	leucine-rich repeat	21..42	CDD:275378	7/33 (21%)
		leucine-rich repeat	43..64	CDD:275378	6/22 (27%)
		PPP1R42	<44..131	CDD:455733	23/88 (26%)
		leucine-rich repeat	65..89	CDD:275378	4/23 (17%)
		leucine-rich repeat	90..118	CDD:275378	8/27 (30%)
		dnaA	211..>389	CDD:455861
U2A	NP_610315.1	LRR_9	1..175	CDD:405295	39/175 (22%)
		leucine-rich repeat	22..43	CDD:275380	4/20 (20%)
		leucine-rich repeat	46..65	CDD:275378	5/18 (28%)
		leucine-rich repeat	66..89	CDD:275378	6/22 (27%)
		leucine-rich repeat	90..114	CDD:275378	4/23 (17%)