DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14995 and R02F11.4

DIOPT Version :9

Sequence 1:NP_728935.1 Gene:CG14995 / 38487 FlyBaseID:FBgn0035497 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_504289.1 Gene:R02F11.4 / 178871 WormBaseID:WBGene00019842 Length:630 Species:Caenorhabditis elegans


Alignment Length:355 Identity:76/355 - (21%)
Similarity:131/355 - (36%) Gaps:69/355 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LSLIKKLNCWGSDLSDVSIIKRMRGVEVLALSVNKISTLSTFED--C-TKLQELYLRKNSISDIN 79
            |..::.||..|:.|:::..:.:...::.::|:.||||.|:|...  | |.|:.|.:..|||.|::
 Worm   162 LKNLEILNLSGNFLNEIPDLSKCVALQTISLADNKISDLTTITKLICPTNLKNLDISSNSIEDLS 226

  Fly    80 EIAYLQNLPSLRNLWLEENPCCERAGP----NYRSIVLRAL-PNLKKLDNVEVTQQEVEDALRGG 139
            :.:.|.....|....:..||.......    :|||.:.... ..|..:|.     |::||.::..
 Worm   227 QFSVLSTFKKLEEFVVAGNPSITSVLDSDLFDYRSYIFACCSEQLHTIDG-----QKIEDQVQTE 286

  Fly   140 GVAAPEDEVYEDAYQQQQQSRRSSP---QQILQQQQHSYPQHSPPPQQQYQQQQQQQQQQQRGCT 201
            |          :....|...::..|   ..:.||....:|...||...  |:...:..:::|...
 Worm   287 G----------EWLALQGSIKKIGPGNHDALCQQIASHFPDSGPPTPA--QKSCHKALEKRRSMK 339

  Fly   202 TPTKEPPQLPSPLVKNSSEGSI-------SHSASDLYQVQAAQPLKGSQPPTPTKEPVH---PPS 256
            .|.|...:....  .:.:|.|:       :.....|...:|:    ||....|..:.:.   ||.
 Worm   340 VPEKHLEEFSED--TDRTENSVYSPFREWNGKIGALMTPEAS----GSSRRIPVNKNLRMCSPPE 398

  Fly   257 PMYNTITKEQRTSYHQYDRSPGSDQESSPHTYRE-VRPTPFPPSISAHSMKEYYQSDRP--AYPA 318
            ...|...|.|              .|:||:.|.| .||.....|||..::   ..|.|.  ::..
 Worm   399 ARKNKTFKFQ--------------NETSPNRYPENFRPLGSTRSISTETV---ICSSRTEVSFTV 446

  Fly   319 HYRHSQT-----DLTEWEEHQQVPQVHHNP 343
            ..|...|     |....|..:|.|:..|.|
 Worm   447 DGRSESTPLPRIDCAPLERKEQEPEQRHTP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14995NP_728935.1 leucine-rich repeat 21..42 CDD:275378 4/20 (20%)
LRR_8 41..99 CDD:290566 17/60 (28%)
leucine-rich repeat 43..64 CDD:275378 8/23 (35%)
LRR_4 44..82 CDD:289563 15/40 (38%)
LRR_RI <56..>123 CDD:238064 18/74 (24%)
leucine-rich repeat 65..89 CDD:275378 7/23 (30%)
leucine-rich repeat 90..118 CDD:275378 6/32 (19%)
R02F11.4NP_504289.1 leucine-rich repeat 57..78 CDD:275380
LRR_RI <118..245 CDD:238064 22/82 (27%)
leucine-rich repeat 122..143 CDD:275380
LRR_8 143..197 CDD:290566 7/34 (21%)
leucine-rich repeat 144..164 CDD:275380 1/1 (100%)
LRR_4 163..205 CDD:289563 11/41 (27%)
leucine-rich repeat 165..186 CDD:275380 4/20 (20%)
leucine-rich repeat 187..211 CDD:275380 8/23 (35%)
leucine-rich repeat 212..236 CDD:275380 7/23 (30%)
leucine-rich repeat 237..256 CDD:275380 3/18 (17%)
DUF2730 <480..557 CDD:287743
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.