| Sequence 1: | NP_728935.1 | Gene: | CG14995 / 38487 | FlyBaseID: | FBgn0035497 | Length: | 454 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001258252.1 | Gene: | Snrpa1 / 100361269 | RGDID: | 2320494 | Length: | 255 | Species: | Rattus norvegicus |
| Alignment Length: | 168 | Identity: | 42/168 - (25%) |
|---|---|---|---|
| Similarity: | 74/168 - (44%) | Gaps: | 34/168 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSRLTEEMVIARAKQSDLSLIKKLNCWG------------------SDLSDVSIIK-----RMRG 42
Fly 43 VEVLALSVNKISTLSTFED----CTKLQELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCER 103
Fly 104 AGPNYRSIVLRALPNLKKLDNVEV---TQQEVEDALRG 138 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG14995 | NP_728935.1 | leucine-rich repeat | 21..42 | CDD:275378 | 7/43 (16%) |
| leucine-rich repeat | 43..64 | CDD:275378 | 5/24 (21%) | ||
| PPP1R42 | <44..131 | CDD:455733 | 25/93 (27%) | ||
| leucine-rich repeat | 65..89 | CDD:275378 | 8/23 (35%) | ||
| leucine-rich repeat | 90..118 | CDD:275378 | 7/27 (26%) | ||
| dnaA | 211..>389 | CDD:455861 | |||
| Snrpa1 | NP_001258252.1 | LRR_9 | 1..175 | CDD:405295 | 42/168 (25%) |
| leucine-rich repeat | 22..43 | CDD:275378 | 2/20 (10%) | ||
| leucine-rich repeat | 44..65 | CDD:275378 | 5/20 (25%) | ||
| leucine-rich repeat | 66..89 | CDD:275378 | 4/22 (18%) | ||
| leucine-rich repeat | 90..114 | CDD:275378 | 8/23 (35%) | ||
| leucine-rich repeat | 115..127 | CDD:275378 | 4/11 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||